Gene Clim_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1199 
Symbol 
ID6353716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1292617 
End bp1293066 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID642668815 
Productmethyl-viologen-reducing hydrogenase delta subunit 
Protein accessionYP_001943245 
Protein GI189346716 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.461451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC CATTCGAACC GAAAATCGTC GCGTTTGTCT GCACCTACTG CACCTATGCA 
GGAGCGGATC TTGCCGGCAC CAGCCGGCTG AAATATCCCC CGAACATCCG CATGGTGCGA 
CTTCCCTGCA CGGGAAGAAT CAGCCCGATG TTCATTCTCA AAGCTCTGCA GAAAGGTGCG 
GACGGCGTAC TGGTGAGCGG CTGTCATCCG GGCGACTGCC ACTTCACCCA CGGCAACTAC 
CACGCACGGC GCCGGTGGAC GGTGTTTCGG GCACTTCTGA ACTTTACCGG CATTCCTCTC 
GAACGGATCA GGTTCTCCTG GATCAGCGCC GCTGAAGGGG TAAAATTCGC AGAGCTCATC 
AGCAGCCTGA CTGAAGACAT CCGCAAACTT GGCCCATTTG AGCAATACAA GGCGATAATC 
CATGAGACCG AAGCTCCGGT TTCGCTTTAA
 
Protein sequence
MSKPFEPKIV AFVCTYCTYA GADLAGTSRL KYPPNIRMVR LPCTGRISPM FILKALQKGA 
DGVLVSGCHP GDCHFTHGNY HARRRWTVFR ALLNFTGIPL ERIRFSWISA AEGVKFAELI 
SSLTEDIRKL GPFEQYKAII HETEAPVSL