Gene Dvul_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0829 
Symbol 
ID4664239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1017192 
End bp1018676 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content66% 
IMG OID639819050 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_966277 
Protein GI120601877 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.330153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTCC TGAAGGGGAA GGAACTCCGC GTCGTAGGGT TCCTGTGCAA CTGGTGTTCG 
TACGGCGGTG CCGACACCGC CGGGGTGGGC CGCTTCTCGC AGCCCACCGA CCTGCGTATC
GTGCGCGTGC CCTGTTCGGG GCGCGTCGAT CCGCTCTTCA TCATCAAGGC CTTGATCAGC
GGTGCGGACG GAGTGCTCGT CTCCGGCTGT CATCCGCGCG ACTGTCACTA TAGCCACGGC
AACTTCTACG CACGGCGTCG GCTTGAGACG CTCAAGTCCT TCCTGCCCGC CCTCGGCATC
GACCCGGAAC GGTTCCAGTA CACGTGGGTG TCGGCATCGG AAGGGCAACG CTGGAAGAAC
GTGGTGTCGA CCTTCGTGGA GAAGGTGCAC CAGCTTGGGC ACGCCCCGCA TATCGAAGAT
GCTGTGCCGT ACCTGCCCCT CGCAGCGGCG GGGGATGCGT TGCGTGCCCC GCTGCGTCCT
CTGGCGTATC CGCCTGCGGG TTCCCTCGCC CAGTCGCTTG AGCGTCTGCG CGAAAGGATA
CGCGCCGCCC TGCCCGAACT CGATTGCGTC ATCGGCTGGC AGCAGGGGTA CGACGCCCTG
CACGCCACGC CGCTCTTCAT GCGCAAGCCG GAAGACGTGG ACAAGCTCAC TTGGGGGCCG
CTCAACGTGC ATAATCTCGC CACCTACCTG CCGCAGTTCA AGAACCGCAA GGTGGGGGTG
GTGGTGAAGG GCTGCGACAG CCGGTCGGTC ATCGAACTGT TGCAGGAGAA GCTCATCGAA
CCCGACAATG TCCGGGTCTT CGGTATGCCC TGCGAGGGTG TGGTCGACGT GGCACAGGTG
CAGAAGGCAC TGGGGGCTGA CGATGGCGGC GACCATGCCG GCACCGCGCC CGCATCGCTG
TCCGTCGAGG GCGATGTGCT GACCGTGACG GGGGCTACCC CCGCGCAGCT GAAACTTGCC
GATGTGGTGG CCGAGAAATG CCGCACCTGC GACACGCCGT CGCCCCTGCT TGGCGACGTG
GTGGAGGGAG TCGCATCGGC CCCTGCCGGA GCACCTCCGG CAGCCCCGCC CGGTCTGGAG
GCGCTGGACG CCATGACGCC CGAACAGCGG CGCGGCTTCT GGCGGGCCCA GATGGAGCGC
TGCCTGCGCT GCTACGCCTG CCGCAACGCC TGCCCCATGT GCGTGTGCCG TGACCAGTGC
ATCGGCGAAA GCCGCGACCC CCACTGGACG ACGCAGGAAG GCAACGTGCG TGAGAAGCTC
CAGTTCCAGA TCATCCATGC GCTGCATCTG GCAGGACGTT GCACCGAATG CGGCGAATGC
CAGCGGGCAT GCCCGGTGAA CATCCCCGTT CTGGCCCTGA AGCAGTGGAT GAACCGTTCG
GTGCGCGACC TGTTCGACTA CCGGGCGGGC ATGGACGTGG AGGCGGTGCC GCCGCTGCTG
TCGTTCGCCG TGGAAGAAAA GAACATCAAG GAGCATGGGC TGTGA
 
Protein sequence
MPVLKGKELR VVGFLCNWCS YGGADTAGVG RFSQPTDLRI VRVPCSGRVD PLFIIKALIS 
GADGVLVSGC HPRDCHYSHG NFYARRRLET LKSFLPALGI DPERFQYTWV SASEGQRWKN
VVSTFVEKVH QLGHAPHIED AVPYLPLAAA GDALRAPLRP LAYPPAGSLA QSLERLRERI
RAALPELDCV IGWQQGYDAL HATPLFMRKP EDVDKLTWGP LNVHNLATYL PQFKNRKVGV
VVKGCDSRSV IELLQEKLIE PDNVRVFGMP CEGVVDVAQV QKALGADDGG DHAGTAPASL
SVEGDVLTVT GATPAQLKLA DVVAEKCRTC DTPSPLLGDV VEGVASAPAG APPAAPPGLE
ALDAMTPEQR RGFWRAQMER CLRCYACRNA CPMCVCRDQC IGESRDPHWT TQEGNVREKL
QFQIIHALHL AGRCTECGEC QRACPVNIPV LALKQWMNRS VRDLFDYRAG MDVEAVPPLL
SFAVEEKNIK EHGL