Gene Sfum_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2148 
Symbol 
ID4459537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2625693 
End bp2626178 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content61% 
IMG OID639702914 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_846265 
Protein GI116749578 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGG ACGACAAGGC ATTCGAACCG AAGATTCTTG GGTTTCTGTG CAACTGGTGC 
AGCTATGCCG GCGCGGACCT CGCCGGGGTG AGCCGCCTGC AGTACCCGGC CAATATTCGC
ATCATCCGGG TGATGTGCTC CGGAGGGATC TCTCCCCACC ACCTCCTGCA CGCCTTTCAG
AAGGGGGCCG ACGGGGTCTT GATCGGGGGC TGTCACATCG GCGACTGCCA TTATCTCAAG
GGCAACTACA TGACCATGAA GCGGGTGAAG TTTCTGGAAG GGTTGCTTCA ATTCGCCGGC
TACGATCCTC GACGGCTCCG CCTGGAATGG ATTTCGGCGG CGGAGGGCCT CAGGTTTGCG
GAGGTGGTTC GGGAGTTCAC CGATCAAATT CGCAGTCTCG GTCCCGCGCC CACCTTCGAG
GCTGTGCCGG GGATGGATGC CCATCCGTCC GAAGCGTTTT CCGGACGAGG GGAGTTCATG
GCGTAA
 
Protein sequence
MDVDDKAFEP KILGFLCNWC SYAGADLAGV SRLQYPANIR IIRVMCSGGI SPHHLLHAFQ 
KGADGVLIGG CHIGDCHYLK GNYMTMKRVK FLEGLLQFAG YDPRRLRLEW ISAAEGLRFA
EVVREFTDQI RSLGPAPTFE AVPGMDAHPS EAFSGRGEFM A