| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2314 |
|---|
| Symbol | |
|---|
| ID | 8420174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2630553 |
|---|
| End bp | 2630999 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038917 |
|---|
| Product | methyl-viologen-reducing hydrogenase delta subunit |
|---|
| Protein accession | YP_003199176 |
|---|
| Protein GI | 258406434 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCC AAGATGGAAA CAAGCTCCGC ATAGTGGGCT TTCTGTGTAA TTGGTGTTCG
TACGGCGGGG CGGACACCGC CGGTGTCTCG CGCTTCGAAC AGCCGATGGA TTTGCGCATT
GTGCGGCTGC CCTGCACCGG GCGCGCCAAC CCGCTTTTTA TCATGAAGGC CTTTTTTGGC
GGGGCGGACG GTGTGCTCGT TTCAGGCTGC CACCCTCGGG ACTGCCACTA TTCTGAGGGC
AATTACTACG CCCGCCGGAG GCTGGAGCTG CTCAAACGGA CCTTGCCGGT GCTGGGCATC
GATCCGGAAC GATTTGAGTA CACCTGGGTC TCCGCCTCTG AGGGCAAACG GTGGCAGACC
GTCGTTACCC GCTTTACCGA GCGCATCCAC ACCCTGGGAC CGGCCCCGGC CATTGAAAAG
CAATGCGCTC CGGCCCTTCA AGCCTAG
|
|---|
| Protein sequence | MSAQDGNKLR IVGFLCNWCS YGGADTAGVS RFEQPMDLRI VRLPCTGRAN PLFIMKAFFG
GADGVLVSGC HPRDCHYSEG NYYARRRLEL LKRTLPVLGI DPERFEYTWV SASEGKRWQT
VVTRFTERIH TLGPAPAIEK QCAPALQA
|
|---|
| |