Gene Daud_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0878 
Symbol 
ID6026632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp940472 
End bp940909 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID641593690 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_001717023 
Protein GI169831041 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.340433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGG ACCCGAGGAT CATCAGTTTT TGCTGTTATA ACTGTGCGTA TGCCGCCGCT 
GACCTGGCGG GGGCCATGCG GGTGTCGTAC GACCCCCGGG TGACCATCGT GGGGGTGCCG 
TGCACCGGCG CCATGGAGGC CGTGGTGGTG CTGGGCGCCT TCGAGGAAGG CGCCGACGGG 
GTATTCGTCG CCGGCTGCCT GGACGGCGAG TGCCACTATA AGGAGGGCAA CCTGCGGGCC 
CGGGAGCGGG TGGCCAGGCT GCGGGAGCGG CTGTCCGAGG TGGGCCTGGA GCCGGAGCGG 
CTGGAGATGT ACCAGGTGTC GGCGGCCATG GGCGCCCGCT TCGGAGAGAT CGCCGCCGAG 
TTCGTGGACC GGATCAAAGC GCTGCCTCCG TCCCCGTTGC GGCGGGGTGC CGCCGTCAAA 
GGAGGTATGT CCAGATGA
 
Protein sequence
MNTDPRIISF CCYNCAYAAA DLAGAMRVSY DPRVTIVGVP CTGAMEAVVV LGAFEEGADG 
VFVAGCLDGE CHYKEGNLRA RERVARLRER LSEVGLEPER LEMYQVSAAM GARFGEIAAE 
FVDRIKALPP SPLRRGAAVK GGMSR