Gene Daud_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0115 
Symbol 
ID6025818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp125438 
End bp125959 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID641592968 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_001716315 
Protein GI169830333 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGAAA CCGAATGGCG GCCCAAAATC ATCGTCTTCT GCTGCCACCG CTGCGCCCCC 
GGGGCGGCGG ACACGGCCGG GATAATGCGC CTGCAGTACC CTCCGGAAGT GCTGATCATC
CGGGTGCCCT GCTCGGGCCG GGTTGACGAG GAGTTTATCC TGCGCGCCTT TGCGGGCGGC
ACGGAGCTGA CAGAAAAGCT GCGCCGAGTA GGGGTTGACG AGGAGTTTAT CCTGCGCGCC
TTTGCGGGCG GCGCCGACGG CGTGGTGGTG GCCGGGTGTC TGGAAGGCAC CTGTCACTAC
CTGGTGGGAA ACACCCGTGC TGCCAGGCGG GTGGAGCGGA TGCGGACGTT TCTCTCCGAG
GTCGGGCTGG AAGCCGAACG GCTGGAAATG CACCATATGG CGGCGTCAAT GGGCACGTCT
TTTGCGCGGA TGGCGGCCGA TTTTACGGGG CGGGTGCGGC TCCTGGGGCC CGCATTCCCG
GCGGTGCACG CCGCGTCCGC CGAAGGGGGG AGCGGTCTGT GA
 
Protein sequence
MVETEWRPKI IVFCCHRCAP GAADTAGIMR LQYPPEVLII RVPCSGRVDE EFILRAFAGG 
TELTEKLRRV GVDEEFILRA FAGGADGVVV AGCLEGTCHY LVGNTRAARR VERMRTFLSE
VGLEAERLEM HHMAASMGTS FARMAADFTG RVRLLGPAFP AVHAASAEGG SGL