| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0028 |
|---|
| Symbol | |
|---|
| ID | 8135327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 35696 |
|---|
| End bp | 36277 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644867645 |
|---|
| Product | methyl-viologen-reducing hydrogenase delta subunit |
|---|
| Protein accession | YP_003019873 |
|---|
| Protein GI | 253698684 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATT TCGAGCCGAA GATAGTCGCT TTCGTCTGCA CCTGGTGCAC CTACGCCGGT
GCGGACCTGG CCGGCACCAG CCGGATGCAG TACCCGGCCA ACGTCCGGGT GCTCAAGTTC
CCCTGCACGG GGCGTATCGA CCCGGTCTTC ATCCTGCGCG CCTTCCAGAA AGGGGCGGAC
GGGGTGCTGG TCTCCGGGTG CCACCCCGGC GACTGCCACT ACATGGCCGG CAACTTCCAC
GCCCGGCGCC GATTCGCGGC TTTCCGCGCC CTGCTCGACT TCGTGGGGGT CGACCTGAAC
CGGCTCCAGT TCTCCTGGGT CTCCGCCGCC GAAGGTGGGA AGTGGGTCGA GGTGGTGACC
GAGCTGACCG AAAGGGTGCG CAGCATGGGA CCGATGCTGG AGTTCAAGTC GCTGGAGCAC
GAGGAGCTGT GGTCCACCTT CGCCGAGGCT ACGGCGGACA AGTCCACCAC GTTCGCCGAG
GCTACGGCGG ACAAGTCCAC CACGTTCGCC GAGGCTACGG CGGACAAGTC CACGGTGCTC
AATACACCGG AACTTAAAGA GGCCTACGAC AGCATCAAGT AA
|
|---|
| Protein sequence | MHDFEPKIVA FVCTWCTYAG ADLAGTSRMQ YPANVRVLKF PCTGRIDPVF ILRAFQKGAD
GVLVSGCHPG DCHYMAGNFH ARRRFAAFRA LLDFVGVDLN RLQFSWVSAA EGGKWVEVVT
ELTERVRSMG PMLEFKSLEH EELWSTFAEA TADKSTTFAE ATADKSTTFA EATADKSTVL
NTPELKEAYD SIK
|
|---|
| |