Gene Sfum_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2154 
Symbol 
ID4459543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2634991 
End bp2635452 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID639702920 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_846271 
Protein GI116749584 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG GATTCGAACC CATTGTCGTT TGTTTCTGCT GCCACTGGTG CTCCTATGCG 
GCCGCCGACC TGGCGGGCAG CATGCGGCTC CAGTACCCGG CCAACGTGCG CATCGTGAAA
GTGCCCTGCA CGGGGCGGGT GGACGTCGTT CACCTGCTGC GCACGCTGGA ACGCGGTGCC
GACGGGGTAT TCGTCTCCGG CTGTCTTCCG GGCGACTGCC ACTACATTTC CGGAAACAAC
CGGGTGATCA GGCGGGTTGC GCATGTGAAG GGATTGCTGG CGAGCATCGG GATCGAGCCG
GAACGAGTGG AGCTTTACTT CAACTCGGCG GCCATGGCTC CCCAGTTTGC GCAGTGCTGT
CGTGATTTCA CTGAAAGGAT CCGAGAGCTG GGGCCGTGCC TGAGAGCCGC AAAGCCCGAA
ATCCGTTCAG CGCCGGGAGT GCCGGCCGGG ACTTCGGCTT GA
 
Protein sequence
MQNGFEPIVV CFCCHWCSYA AADLAGSMRL QYPANVRIVK VPCTGRVDVV HLLRTLERGA 
DGVFVSGCLP GDCHYISGNN RVIRRVAHVK GLLASIGIEP ERVELYFNSA AMAPQFAQCC
RDFTERIREL GPCLRAAKPE IRSAPGVPAG TSA