| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1647 |
|---|
| Symbol | |
|---|
| ID | 3673032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1730050 |
|---|
| End bp | 1732308 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637710334 |
|---|
| Product | heterodisulfide reductase, subunit A |
|---|
| Protein accession | YP_315405 |
|---|
| Protein GI | 74317665 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0109393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA TCAAAGTCGC AGCGTACATC TGCAAGGGCT GCGGACTCGG CGAGCGCCTC
GACACCGACG CGCTCGTGAA GATCGCGCAG AAGGACGGCA AGGTCCCTCT CGCCAAGTCG
CACGATTTCC TGTGCAACGC CGACGGCGTC GCGATGATCA AGAACGACAT CGCCAACGAG
GGCGTGACCC ACATCATGAT CGGCGCGTGC TCGCGGCGCG CCAAGACCGA GGCGTTCTAT
TTTCCCGAAA ACGCCGTCGC ACGCGCCAAC CTGCGCGAGG GCGTGATCTG GATCCGCCCC
GACACCGACG AGGCGCGCGA GACGACGCAG GAGATGGCCG AGGACTACGT CCGCATGGGC
TGTGCCGAAG TCAAGGCGAT GGCCGCGCCG GCGGGCAACC CCAACACCGG GAGCAGCAAG
ACGCTGCTCG TCGTCGGCGG CGGCGTGACC GGCATGACGA CCGCGATCGA GGCGTCCAAG
ACCGGCTACC CGGTCGTGCT CGTCGAAAAA TCCGGCGCGC TGGGCGGCTG GGGCGGCAAG
CTTTACAAGC GCGTGCCTGT GCACGAGCCC TACAAAACGC CGATGGACAC GGGCGTCGCC
GACCTCGTCT CGCAGGTCCT CGGCGACAGC AACATCAAGC TGTATCTGAA CGCGAGCATC
GCGAAGACCG ACGGCGCGCC CGGACGCTTC GTCGTCGAGA TCGCGACCGA GTCCGGCGCG
ACGCACACCG AGGACATCGG CGCGATCGTG CAGGCGACCG GCTTCACGCT GTACGACATG
AACAAGCTGC CCGAGCTCGG CGCGGGCAAG TCGCCGAACG TCGTCGACCA GGCGGGGCTC
GAGGCCCTGG CGAATGCTGC GGCCGCGGGC GACGGCGTGA TTCGCCGGCC TTCCGACGGT
CAGCCCGTCA AGTCGGTCGT GTTCGTGCAG TGTGCCGGTC AGCGCGATCC GACGGGTCAG
CACCTGTCCT ACTGTTCGGG CTTCTGCTGC AACGCCAGCA TCAAGCAGGC GATGTACTTC
AAGGACGCCA ACCCGGCGGT CGACACGACG ATCATCTATA CCGACCTGCG CACGCCCGGC
AACGGCGAAG ACTTCTACCG CAGCGCGCAG GAGAAGGGCG TCATCTTCAC CAAGGGCAAG
GTCTCGGAAG TCGTCCCCGG CGGCGACAGC CTCACCGTGA CCTTCCACGA TCTGATCCTC
GACGACAGCA AGGCGACAAT GGGCGACGTC GACCTCGTCG TGCTGGCAAC CGGCCAGGTC
GCGAACTCGG GCGTCAACAT CGACGCCCTG ACCAAACCGC AGGTCGAGGG CCAGGAAGGT
GGACAGCAGT CCGGCGCGAC GGTCGAAGTC AAGCCGATCT CGATCCTCAA CCTGACCTAT
CGTCAGGGCC CGGACGTGCC GCAGCTGAAG CAGGGCTTCA CCGACTCGCA CTTCATCTGC
TTCCCTTACG AAACGCGCCG CACGGGCATC TACACGGCCG GCCCGGTGCG TCGTCCGATG
GACATGACGC AGGCCCGCGA GGACGCGACC GGCGCCGCGC TGAAGGCGAT CCAGGCGCTG
GAAAATGCCG AACTGGGCCG CGCGGCGCAT CCGCGCTCGG GCGATCTTTC CTTCCCGAAG
GTGCGTCTCG AAGGCTGCAC GCAGTGCAAG CGCTGTACGG TCGAATGTCC GTTCGGTGCG
ATCGACGAGG ACGAGAAGCG CTTCCCGGTC TTCAACGAAT CGCGCTGCCG CCGGTGCGGT
ACCTGCATGG GCGCGTGCCC GGTGCGCGTG ATTTCGTTCG AGAACTACTC GGTCAACACG
GTCGGCGCGC AGATCAAGGC CGTCGACATT CCCGACGAAT TCAGCGAGAA GCCGCGCATC
CTGATCCTCG CCTGCGAGAA CGACGCCTAC CCCGCGCTCG ACATGGCCGG CATGAACCGC
AACGAGTACT CGGCCTTCGT GCGCATCATC CCGATCCGCT GTCTCGGTTC GGTCAACACG
ATCTGGGTGA CCGACGCGCT CAACGCGGGC TACGACGGCG TCATGATGAT GGGCTGCAAG
TCCGGCGACG AGTACCAGTG CCACTTCGTC AAAGGCTCGG AGCTGGGCCG CGTGCGCATG
TCCAAGATCG ACGACACGCT GAAGACGCTC AACCTGGAGT CGGAGCGCGT GCGCGATCTC
GAGGTGGCGA TCACCGACAT CGAACGCGTG CCCGAGATGA TCAACAAGTA CGCGGAAGAG
CTGGTTGCCG TCGGCCCCAG CCCGTTCAAG GGATTCTAA
|
|---|
| Protein sequence | MADIKVAAYI CKGCGLGERL DTDALVKIAQ KDGKVPLAKS HDFLCNADGV AMIKNDIANE
GVTHIMIGAC SRRAKTEAFY FPENAVARAN LREGVIWIRP DTDEARETTQ EMAEDYVRMG
CAEVKAMAAP AGNPNTGSSK TLLVVGGGVT GMTTAIEASK TGYPVVLVEK SGALGGWGGK
LYKRVPVHEP YKTPMDTGVA DLVSQVLGDS NIKLYLNASI AKTDGAPGRF VVEIATESGA
THTEDIGAIV QATGFTLYDM NKLPELGAGK SPNVVDQAGL EALANAAAAG DGVIRRPSDG
QPVKSVVFVQ CAGQRDPTGQ HLSYCSGFCC NASIKQAMYF KDANPAVDTT IIYTDLRTPG
NGEDFYRSAQ EKGVIFTKGK VSEVVPGGDS LTVTFHDLIL DDSKATMGDV DLVVLATGQV
ANSGVNIDAL TKPQVEGQEG GQQSGATVEV KPISILNLTY RQGPDVPQLK QGFTDSHFIC
FPYETRRTGI YTAGPVRRPM DMTQAREDAT GAALKAIQAL ENAELGRAAH PRSGDLSFPK
VRLEGCTQCK RCTVECPFGA IDEDEKRFPV FNESRCRRCG TCMGACPVRV ISFENYSVNT
VGAQIKAVDI PDEFSEKPRI LILACENDAY PALDMAGMNR NEYSAFVRII PIRCLGSVNT
IWVTDALNAG YDGVMMMGCK SGDEYQCHFV KGSELGRVRM SKIDDTLKTL NLESERVRDL
EVAITDIERV PEMINKYAEE LVAVGPSPFK GF
|
|---|
| |