26 homologs were found in PanDaTox collection
for query gene CPS_2031 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_2031  hypothetical protein  100 
 
 		 398 aa  817    Colwellia psychrerythraea 34H  Bacteria  normal  0.471992  n/a   
 
 
-
 
NC_007643  Rru_A3015  twin-arginine translocation pathway signal  25.87 
 
 		 382 aa  130  3e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.39758  n/a   
 
 
-
 
NC_010501  PputW619_3274  extracellular solute-binding protein  24.68 
 
 		 375 aa  90.1  6e-17  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1021  spermidine/putrescine ABC transporter, periplasmic binding protein, putative  22.29 
 
 		 375 aa  79  0.0000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2123  hypothetical protein  22.98 
 
 		 372 aa  78.6  0.0000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0323  twin-arginine translocation pathway signal  21.34 
 
 		 371 aa  74.7  0.000000000003  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_1540  ABC spermidine/putrescine transporter, periplasmic ligand binding protein  22.42 
 
 		 353 aa  68.9  0.0000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.713242  normal  0.652305 
 
 
-
 
NC_013171  Apre_1226  extracellular solute-binding protein family 1  24.92 
 
 		 359 aa  55.1  0.000002  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000135939  n/a   
 
 
-
 
NC_011988  Avi_5285  ABC transporter substrate binding protein (putrescine)  21.51 
 
 		 360 aa  52.4  0.00001  Agrobacterium vitis S4  Bacteria  normal  0.416451  n/a   
 
 
-
 
NC_011729  PCC7424_1221  extracellular solute-binding protein family 1  21.79 
 
 		 359 aa  48.5  0.0002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011662  Tmz1t_1330  extracellular solute-binding protein family 1  21.09 
 
 		 349 aa  48.9  0.0002  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I1583  spermidine/putrescine-binding periplasmic protein precursor (SPBP)  21.43 
 
 		 362 aa  47.8  0.0003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0473653  n/a   
 
 
-
 
NC_009457  VC0395_A1036  spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein  23.42 
 
 		 366 aa  47.4  0.0004  Vibrio cholerae O395  Bacteria  unclonable  0.0000000000000359474  n/a   
 
 
-
 
NC_009457  VC0395_A1035  spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein  22.06 
 
 		 345 aa  47.4  0.0004  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000879227  n/a   
 
 
-
 
NC_013421  Pecwa_2144  spermidine/putrescine ABC transporter periplasmic substrate-binding protein  20.54 
 
 		 347 aa  47.8  0.0004  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_008698  Tpen_0910  extracellular solute-binding protein  24.68 
 
 		 360 aa  47  0.0006  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003485  ABC transporter periplasmic spermidine putrescine-binding protein PotD  20.79 
 
 		 345 aa  47  0.0006  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00749522  n/a   
 
 
-
 
NC_009783  VIBHAR_02286  hypothetical protein  21.86 
 
 		 343 aa  46.6  0.0007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02285  hypothetical protein  21.35 
 
 		 345 aa  45.8  0.001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003484  ABC transporter periplasmic spermidine putrescine-binding protein PotD  22.77 
 
 		 343 aa  45.8  0.001  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00000109214  n/a   
 
 
-
 
NC_012917  PC1_1859  spermidine/putrescine ABC transporter periplasmic substrate-binding protein  20.2 
 
 		 347 aa  45.4  0.002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.112661  n/a   
 
 
-
 
NC_011982  Avi_8146  spermidine/putrescine binding protein of ABC transporter  31.91 
 
 		 371 aa  44.7  0.003  Agrobacterium vitis S4  Bacteria  decreased coverage  0.00458388  n/a   
 
 
-
 
NC_013923  Nmag_3851  extracellular solute-binding protein family 1  19.62 
 
 		 353 aa  44.7  0.003  Natrialba magadii ATCC 43099  Archaea  normal  0.0852756  n/a   
 
 
-
 
NC_009523  RoseRS_1645  extracellular solute-binding protein  20.13 
 
 		 396 aa  44.3  0.004  Roseiflexus sp. RS-1  Bacteria  normal  0.222493  normal  0.608221 
 
 
-
 
NC_011312  VSAL_I1584  spermidine/putrescine-binding periplasmic protein precursor (SPBP)  19.87 
 
 		 347 aa  43.9  0.005  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00366918  n/a   
 
 
-
 
NC_009767  Rcas_2837  extracellular solute-binding protein  20.75 
 
 		 396 aa  43.5  0.007  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000153831  normal  1 
 
 
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