| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2837 |
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| Symbol | |
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| ID | 5540326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3677271 |
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| End bp | 3678461 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894966 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001432926 |
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| Protein GI | 156742797 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000153831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAG GACGCACCAG GTTCATTGCG CTGTTGCTCG CCGTGCTGCT GACACTCGCA
GCATGCGGCG GGCAGCCGAC CGGCAGCCCC GGCAATGAAT ACGGCAGCGG CGGCGCGACA
ACCGAGCCGA CGACTGCTCC TCCGGCGCAA CCGTCTACAG GTGACGAGTT GCAGGTTGAT
CGCTCGCGGC TCTCGAGTGA ACTCAGATTC TTCAACTGGA CGGATTATGT CGATCCTTCA
ATCCTGGAAG ATTTTGAGAA AGAGTATGGC GTCAAAGTGA TTGTTGACCT CTTCGACGCT
AACGAAGATA TGCTCGCCAA GGTGCGCGCC GGGCGCTCCG GGTACGACAT TGTGACGCCA
TCGGACTATG CGGTTGAGAT CATGTGGCGT GACGGACTCA TCGCAAAACT TGACAAGTCG
CTGCTGCCCA ATTTGAAGAA CATCGATCCC GACCTGCTCA ATAAATATTT CGATCCGGGG
AATGTCTATT CTGTGCCGTA CATGTACGGC ATTACTGGAA TCGCCTACAA CCGGCAATCC
TTCCCCAACG GCGTCGAGAG TTGGGCGGTG CTGTTCGACA CGGCGGAGAT CGCGCGCTAT
CGCGGTCAGT TCAGCATGCT CGACGATGAA CGCGAAACAC CCGGCGCGGC GCTGAAATTC
CTGGGCTACT CACTGAATGA AACCAGCCCG GAGGCGCTGA AAAAAGCGCA GGACCTGTTG
ATCGCCCAGA AACCGTTCCT GGCCGGGTAC AACAGCAGTG ATGTCAACCG GAAACTGGCG
AGCGGCGAAT ATGTGATTGC GCATGCCTGG AGCGGTTCGG CATTGCAGGC GCGCAACGGC
TTGGGCGACG AGTTCTCCGG CAACCCGGAT ATCGCCTTTG TTATTCCAAA GGAAGGCGGC
ATGATCTGGA TGGACAATAT GGTCATCCTG GCCGACTCGC CGAACGCTTA TACGGCGCAT
GTGTTCATGA ACTTCCTGAT GCGCCCTGAT ATTGCTGCGC GCAACGCCGA ATACATTGGC
TATCTCTCGC CGAACGTCGA GGCGATCAAA CTGCTGCCGC AGGAGATTAT CGACCTGTAT
AACGAAGGGT TTGCCCCGAA CGATGAGGTT CTGAAACGGT TGGAATGGGC AATACGCAAT
GATCAGACTG CCGCCTTCAC CGACCTGTGG ACGGCGGTGA AAGGGGAGTA G
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| Protein sequence | MLKGRTRFIA LLLAVLLTLA ACGGQPTGSP GNEYGSGGAT TEPTTAPPAQ PSTGDELQVD
RSRLSSELRF FNWTDYVDPS ILEDFEKEYG VKVIVDLFDA NEDMLAKVRA GRSGYDIVTP
SDYAVEIMWR DGLIAKLDKS LLPNLKNIDP DLLNKYFDPG NVYSVPYMYG ITGIAYNRQS
FPNGVESWAV LFDTAEIARY RGQFSMLDDE RETPGAALKF LGYSLNETSP EALKKAQDLL
IAQKPFLAGY NSSDVNRKLA SGEYVIAHAW SGSALQARNG LGDEFSGNPD IAFVIPKEGG
MIWMDNMVIL ADSPNAYTAH VFMNFLMRPD IAARNAEYIG YLSPNVEAIK LLPQEIIDLY
NEGFAPNDEV LKRLEWAIRN DQTAAFTDLW TAVKGE
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