| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1645 |
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| Symbol | |
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| ID | 5208600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2019189 |
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| End bp | 2020379 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640595251 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001275987 |
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| Protein GI | 148655782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.222493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.608221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA GACGAATGAG ATTGGGTACA CTGCTGCTCG TGGTGCTGCT GGCGCTGGCA
GCGTGCGGCG GACAGCCGAC CGGAAGCCCT GGCAATGAGT ATGGCAGCGG CGGTGCAACC
GAGCCGACCA CGGCGCCCGG CGCAACGCAA CCGCCAGCTG GCGATGAGTT GCAGGTTGAT
CGCTCCAGAC TCTCGCGTGA ACTCAGATTC TTCAACTGGA CCGATTACAT CGATCCCTCG
ATCCTCGAAG ACTTCGAGAA AGAGTATGGC GTCAAAGTGA TCGTCGATCT GTTCGACGCC
AACGAAGACA TGCTCGCCAA AGTGCGCGCC GGTCGCTCCG GCTACGACAT CGTCACCCCC
TCGGATTACG CCGTCGAGAT CATGTGGCGC GATGGACTGA TCGCAAAACT CGACAAATCG
CTGCTGCCCA ATCTGAAGCA TATCGATCCC GATCTGCTCG ATAAATACTT CGATCCGGGG
AATGTCTACT CCGTACCATA CATGTACGGC ATTACCGGAA TCGCTTACAA TCGATCCTTC
TTCCCGAACG GCGTCGATAG TTGGGCGGCA CTATTCGACA CAGCCCAGAT CGAGAAGTAT
CGCGGGCAAT TCAGCATGCT CGACGATGAG CGCGAAACCC CTGGCGCTGC GCTGAGATTC
CTCGGCTACT CACTGAACGA AACCTCGCCA GAGGCGCTGA AGAAAGCGCA GGACCTGCTG
ATTGCGCAGA AGCCGTACCT GGCAGGGTAC AACAGCAGCG ACGTGAACCG GAAACTGGCG
AGCGGCGAGT ATGTCATCGC GCATGCGTGG AGCGGCTCGG CGTTACAGGC GCGCAATGGG
CTTGGAGACG AGTTCTCCGG CAACCCGGAT ATTGCCTTCG TCATCCCGAA GGAAGGCGGG
ATGATCTGGA TGGATAACAT GGTTATTCTG GCAGACTCAC CCAACGCCTA CACTGCGCAT
GTGTTTATGA ATTTTCTGAT GCGCCCCGAC ATCGCTGCAC GCAACGCTGA ATACATCGGC
TATCTCTCGC CGAACGTCGA AGGGATCAAA CTGTTGCCGC AGGAGATCAT CGACCTGTAC
AACGAAGGGT TCGCACCGAA CGACGAAGTG ATGAAACGCC TGGAATGGGC GATACGCAAC
GAGCAGACAG CGGCGTTCAC CGATCTGTGG ACGGCGGTCA AGGGGGAGTA G
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| Protein sequence | MLKRRMRLGT LLLVVLLALA ACGGQPTGSP GNEYGSGGAT EPTTAPGATQ PPAGDELQVD
RSRLSRELRF FNWTDYIDPS ILEDFEKEYG VKVIVDLFDA NEDMLAKVRA GRSGYDIVTP
SDYAVEIMWR DGLIAKLDKS LLPNLKHIDP DLLDKYFDPG NVYSVPYMYG ITGIAYNRSF
FPNGVDSWAA LFDTAQIEKY RGQFSMLDDE RETPGAALRF LGYSLNETSP EALKKAQDLL
IAQKPYLAGY NSSDVNRKLA SGEYVIAHAW SGSALQARNG LGDEFSGNPD IAFVIPKEGG
MIWMDNMVIL ADSPNAYTAH VFMNFLMRPD IAARNAEYIG YLSPNVEGIK LLPQEIIDLY
NEGFAPNDEV MKRLEWAIRN EQTAAFTDLW TAVKGE
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