Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2031 |
Symbol | |
ID | 3519075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2102532 |
End bp | 2103728 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284491 |
Product | hypothetical protein |
Protein accession | YP_268759 |
Protein GI | 71278312 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.471992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACATC CACTAGTATT AAAAAAGAGT TACCTAAGAA GAGTAGAACA ATATTTAAGG ATATTAATTT TGTCATTAAC TCGAAGGAAG TATTTAAAAT TATTTACAGC GATATCAGCA TTAGGCATTT CCCCATTGAG TTTTGGGCTC CTTATCTCAA ATAAAAATAT TGAGCATGTC CTGCGGTACA TGTGTTGGGA AGGTTACAAT AACCCACGAG TTATAACTCC TTTTGAAAAA CAGCATAACG TGCAACTCGA CATTGAGCTT ATTGTCGACA GTCCTACAGG ATTTTCTTCA TTAATATCGG AAAAATATAA TAGTTTCGAT GTCGTATCGA TTGATTCTCC ATGGGCCAGA CTGATGGAGG AGAATGATCT ATGTCATTTA TTAGATTTCG ACGAATTTAA GGAGGAATAT GGAAACTTAT ATACCCAATT TTATGACCGC TTTATGTCAC CAATTTCAAA TGGGAAAATA TCAGGAATAC CCACTAGATG GGGTTGGATA GGCCCAACTA TAAATACCGC ATATACTAAT GAAAAGGAGT TTGAATCATA TGCTCCTTTT TTTGATCGTA AGTACCACGG AAAAATCGGT ATAATGGATT GGGGAGATTG GCCAATAATG CCTATTGCCC TCTATGCTGG CATTGATCCT TATAAAAAAC TTGATTCACA TGAACTTGAT GAAATAAGGA AGGTTGTTAG AGCTTTATTT AAAAATAATC CTGTGTTTAT TCGTGACTTG AGCCTTGCAC AAAAAGCACT ATTAGATGGC TCTATTAAAT CTATGATTGG AACGGGTACC TACTTATCTT TATCGTTGAG AAAAGCAGGT TTTTTGCAGA TAAAAACCGT TGTGCCTGAG CCGATTAATG GTCTGAAGCA AAGTATAATA TGGGTTGAAA AAACAGTGGT GATGGCAAAA AACAATAATA TTGAACTGTC TAAAAAGCTA TTAAAACACC TCGTATCAAC TAAGGCTGCA TTAGACATTT CTTTGACGGA TTATGCATGT AATTTGTCAA CCAATCGTCT AGTTGAGGAT CTTTACTCTG AAAAGCAGCG TGAAATCTTT CAATTAGATG AAGTAAAAAG AGTGTGGAAT AAAAGCGTTT TTCATGAGTT ATCTCCGAGT ATCGGAACTC TTCTTGCTCT GTGGCAAGAG GAATTATTTA TGTCCGATTT ACTCTGA
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Protein sequence | MLHPLVLKKS YLRRVEQYLR ILILSLTRRK YLKLFTAISA LGISPLSFGL LISNKNIEHV LRYMCWEGYN NPRVITPFEK QHNVQLDIEL IVDSPTGFSS LISEKYNSFD VVSIDSPWAR LMEENDLCHL LDFDEFKEEY GNLYTQFYDR FMSPISNGKI SGIPTRWGWI GPTINTAYTN EKEFESYAPF FDRKYHGKIG IMDWGDWPIM PIALYAGIDP YKKLDSHELD EIRKVVRALF KNNPVFIRDL SLAQKALLDG SIKSMIGTGT YLSLSLRKAG FLQIKTVVPE PINGLKQSII WVEKTVVMAK NNNIELSKKL LKHLVSTKAA LDISLTDYAC NLSTNRLVED LYSEKQREIF QLDEVKRVWN KSVFHELSPS IGTLLALWQE ELFMSDLL
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