| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1021 |
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| Symbol | |
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| ID | 4579770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1000194 |
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| End bp | 1001321 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639768343 |
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| Product | spermidine/putrescine ABC transporter, periplasmic binding protein, putative |
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| Protein accession | YP_914828 |
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| Protein GI | 119383772 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG ATGAACGGGG TCCGCGCCCC GGGATGTCGC GCCGGGCGGC GCTGTCGCTG
GGGGTCGCGG CGCTGGCGAC GCCGATGCTG TCGCGCCGGG CCTTTGCCGC GCCGACGCAG
TTGACCATGC TGGCCTGGTA CGGCCATGCC GAGCCCGACA TCGTGGCCGA GTTCGAGGCC
GAGAACAACG TCAAGTTCGT GCCGAAATAT TATACCGGCG GCGACAACAT GCTGGGCCTG
ATCTCGCAAA GCCCGCCCGG CACGTTCGAT GTCATCCTGT CGGATGCCGA ATATGTCCAG
CAGCTGAATG CGGCCGGTTA TATCGAGCCT CTCGATCCCG CCGATTATCC CTTCGACGAA
TTCTTCCCAG AGTTCCATCG TTTTCCGGGT CATTGGGACG GTGATACGCT TTATTCGGTC
ATCACCCGCT TTGGCTTTCT TGGCGTTGCC TACAATACCG ATGCCATGAC CGAGGCGCAG
GCCTCGACCT ACGACGTGTT CTGGGACACG GGCCTGCAGG GCAAGGTCGG GCATTTCGAC
TGGCACCTGC CCAACCTGGG GCAGATGAGC CTGCTGAACG GCAATGCCAG CCCCTATGAC
ATCGACACGG CCGCCTGGGA TGCCGTCAAG GAAAAGACCA TGACCCTGCG GCGGCAGATC
GGCGGCTTCT TTGACTATGG CGGCACCTTC TCGTCGCTGA ACAACGGGCA GATGCTGGCC
TTTGCGGGCA TCGGCGACTG GATCACCGGG ACGCTGGAAA GGAACGGTGC CAAGGTCCGC
TCAGTCATTC CTGAACAGGG CGGGCTGCAA TTCACCGAAT CCTTCTCGAT CGGCAAGGGT
TCGTCCAAGG CCGAACTGGC GAAGAAGTGG ATTCAGTATA TCACCTCGGC CAAGGGACAG
GCGAAATCGG CGCAGATGGC GGCCTATCCC TGCCTGATCC CGAACCAGAA GGGCTGGGAG
GTGCTGAATG CCGAAAACCC GGCAGAGGCG GCGCGCCAGG GCATGGTCCC CGCACAAGGC
AATGCCATGG ACCTGATCCG TTCGGGCCGC ATCAAGTATC GGCAGCTCCC GGTGCAGCAA
TCGCTCGAGG AGTGGAACGA TTTCTGGTCG GATTACAAGA GCGCCTGA
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| Protein sequence | MTQDERGPRP GMSRRAALSL GVAALATPML SRRAFAAPTQ LTMLAWYGHA EPDIVAEFEA
ENNVKFVPKY YTGGDNMLGL ISQSPPGTFD VILSDAEYVQ QLNAAGYIEP LDPADYPFDE
FFPEFHRFPG HWDGDTLYSV ITRFGFLGVA YNTDAMTEAQ ASTYDVFWDT GLQGKVGHFD
WHLPNLGQMS LLNGNASPYD IDTAAWDAVK EKTMTLRRQI GGFFDYGGTF SSLNNGQMLA
FAGIGDWITG TLERNGAKVR SVIPEQGGLQ FTESFSIGKG SSKAELAKKW IQYITSAKGQ
AKSAQMAAYP CLIPNQKGWE VLNAENPAEA ARQGMVPAQG NAMDLIRSGR IKYRQLPVQQ
SLEEWNDFWS DYKSA
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