Gene VIBHAR_02286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02286 
Symbol 
ID5555334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2285009 
End bp2286040 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content45% 
IMG OID640907772 
Producthypothetical protein 
Protein accessionYP_001445475 
Protein GI156974568 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGGCTACTCT ATTAGCTGGT AGTGCATGTG CGCTTTCTCT GTTCTCTGGT 
ACAGCGGCAG CGGATGATAA AGAATTAGTG TTTATGAACT GGGGTCCTTA CATCAACAGT 
AATATCCTAG AGCAATTTAC TAAAGAAACT GGCATCAAAG TGATCTACTC GACTTACGAG 
TCGAACGAGA CTTTGTATGC AAAGCTAAAA ACTCATAACC AAGGTTATGA CCTAGTAGTA 
CCTTCAACTT ACTTCGTAGC GAAGATGCGT GACGAAGGCA TGCTACAAAA GATCGATAAG 
ACTAAGCTGA AGAACTTCGG CAACCTAGAC AAGAACTACC TAGACAAGCC TTACGATCCA 
AATAACAACT ACTCTATTCC TCACGTTGTG GCGATTACAG GTCTAGCGGT TAACGCAGAC 
ATGTACGACC CAAACGACTT CCAAAGCTGG GCGGACCTAT GGAAACCTGA GCTTGAAGGT 
CAAGTAATGC TAATGGACGA CACTCGTGAA GTGTTCCACA TTGCACTACG CAAACTGGGT 
TACTCTGGTA ACTCTACGGA TCCAAAACAA ATCGACGAAG CGTACGCCGA GCTACAAAAG 
CTAATGCCTA ACGTTCTAGT ATTTAACTCT GACAACCCAG GTGCACCATA CATGTCTGGC 
GAAGTTGGCG TTGGTATGCT TTGGAACGGT AGCGCAGCAG CAGCTCAAAA CGAAGGTATG 
AACCTGAAGC TTGTATTCCC TAAAGAAGGC GGTATCGGCT GGGTTGATAA CTTCGCAATC 
TCTTCTGGTG CGAAGAACGT AGAAGCGGCT CACAAGATGA TCGACTTTCT ACTACGTCCA 
GAAATCGCAG AGCAAATCTC GGCTGATACG GGTTACCTAA CAGCGGTAGC AGAATCTAAC 
GCTAAGTTCC AAGACGTTGC ACCACTGTTC CCTTCTCAAG AAGATCTTGA CCGCGTTGAA 
TGGCAAGATT CTGTTGGCGA CATGACTGTG AAGTACGAAG ATTACTTCCT AAAGCTGAAA 
GCGGGTCAAT AA
 
Protein sequence
MKKWATLLAG SACALSLFSG TAAADDKELV FMNWGPYINS NILEQFTKET GIKVIYSTYE 
SNETLYAKLK THNQGYDLVV PSTYFVAKMR DEGMLQKIDK TKLKNFGNLD KNYLDKPYDP 
NNNYSIPHVV AITGLAVNAD MYDPNDFQSW ADLWKPELEG QVMLMDDTRE VFHIALRKLG 
YSGNSTDPKQ IDEAYAELQK LMPNVLVFNS DNPGAPYMSG EVGVGMLWNG SAAAAQNEGM 
NLKLVFPKEG GIGWVDNFAI SSGAKNVEAA HKMIDFLLRP EIAEQISADT GYLTAVAESN 
AKFQDVAPLF PSQEDLDRVE WQDSVGDMTV KYEDYFLKLK AGQ