| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2144 |
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| Symbol | potD |
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| ID | 8530544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2333674 |
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| End bp | 2334717 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | spermidine/putrescine ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_003259525 |
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| Protein GI | 261821419 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGCCACACCT ACTGGCAGCC TGCGCGATCG CGTTTGGCAT CAACACCGCC
AATGCCAACG ACGGCAAAAC GCTCTATTTC TATAACTGGA CCGAATACGT TCCGCCAGGT
CTGCTGGAAC AGTTCACCAA AGAAACGGGT ATCAAGGTGA TTTACTCCAC CTATGAATCG
AATGAGAGTA TGTATGCCAA GCTGAAAACC TATAAGGACG GCGCCTACGA TCTAGTCGTG
CCATCGACCT ATTTCATCTC CAAGATGAGT AAAGAAGGCA TGCTGCAAAA GATTGATACC
AGTAAGCTCA GCAATTTCCA TAATCTCGAT CCGAACCTGC TGCACAAGTC CTTCGATCCA
AACAATGACT ACTCTATTCC CTATATCTGG GGCGCAACGG CGATTGGTAT TAATCATGAA
GTGATTGATC CCGCCAGTGT CACCAGTTGG GCCGATCTGT GGGATAAAAA ATATAAAGAC
AGCCTGCTAC TGACGGATGA TGCGCGTGAA GTGTTCCAGA TCGCCCTGCG TAAGCTGGGT
TACTCCGCCA ATACTACCGA TCCGAAGGAG ATTGAGGCGG CGTATAAAGA ACTGCAAGCC
CTGATGCCAA ACGTGCTGAC GTTCAACTCG GACAACCCCG GGAACCCGTT CATCGAGGGT
GAAGTCAATT TGGGCATGGT GTGGAACGGT TCTGCCTACG TGGCGCGTCA GGCAGGAACA
CCGCTGGATG TCATCTGGCC CAAAGAAGGC GGCATCTTCT GGATGGATAG CCTGGCCATT
CCGGCCAACG CCAAGAACGT TGACGGCGCG ATGAAGTTGA TCGACTTCCT GCTACGCCCA
GAAGTGGCAG CACAGGTTGC GGAAACCATC GGCTATCCGA CACCGAATCT GGCAGCGAAA
AAATTACTAC CGGCAGAGGT TTCAGGGGAC AAAACGCTGT ACCCGGACGA TGAAACCATC
GCCAAAGGCG AATGGCAGAA CGACGTTGGT AGCGCCAGCA CGCTATACGA AACCTATTTC
CAGCAGCTAA AAGCGGGTCG TTAA
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| Protein sequence | MKKWPHLLAA CAIAFGINTA NANDGKTLYF YNWTEYVPPG LLEQFTKETG IKVIYSTYES
NESMYAKLKT YKDGAYDLVV PSTYFISKMS KEGMLQKIDT SKLSNFHNLD PNLLHKSFDP
NNDYSIPYIW GATAIGINHE VIDPASVTSW ADLWDKKYKD SLLLTDDARE VFQIALRKLG
YSANTTDPKE IEAAYKELQA LMPNVLTFNS DNPGNPFIEG EVNLGMVWNG SAYVARQAGT
PLDVIWPKEG GIFWMDSLAI PANAKNVDGA MKLIDFLLRP EVAAQVAETI GYPTPNLAAK
KLLPAEVSGD KTLYPDDETI AKGEWQNDVG SASTLYETYF QQLKAGR
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