Gene VIBHAR_02285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02285 
Symbol 
ID5556463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2283726 
End bp2284763 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID640907771 
Producthypothetical protein 
Protein accessionYP_001445474 
Protein GI156974567 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA AATTCTACGC AAGCGCACTG TGTGCGGCGA CGCTAATCGC TACCCCTGCA 
ATGGCTGCTG ATCAAGAACT GTATTTCTAC AACTGGTCGG AATACATTCC AAACGAAGTT 
CTTGAAGACT TTACAAAAGA AACCGGCATC AAAGTTATCT ACTCTACGTA CGAGTCTAAC 
GAAAGCATGT ACGCGAAATT GAAAACTCAA GGTTCTGGTT ACGACTTGGT AGTACCGTCT 
ACCTATTTCG TATCTAAAAT GCGTAAAGAA GGCATGCTGC AAAAGATCAA CAAAGAGAAA 
CTGTCTCACT TTGCTGATCT AGACACTAAC TTCCTGAACA AGCCGTTCGA CCCGAACAAC 
AACTACTCTA TCCCATACAT TTGGGGTGCG ACCGGTATTG GTATCAATGC TGACATGCTA 
GACAAATCGT CTGTTTCTAA ATGGGACGAT TTCTGGGATA GCAAGTGGGA AGGTCAACTA 
ATGCTGATGG ATGATTCTCG CGAAGTATTC CATATTGCAT TGACTAAGCT TGGTTACTCA 
CCAAACACGA CTAACCCTGA CGAAATCAAA GCTGCTTACG AAGAGCTGAA AAAACTAATG 
CCAAACGTAT TGGTATTTAA TTCAGACTTT CCAGCAAACC CATACCTAGC AGGTGAAGTA 
TCACTTGGTA TGCTTTGGAA CGGCTCAGCT TACATGGCTC GTCAAGAAGG TGCGAACATT 
GACATCATCT GGCCAGAAAA AGGCACTATC TTCTGGATGG ACAGCCTAGC AATCCCAGCA 
GGCGCGAAGA ATGTTGATGC AGCTCATAAG ATGATCGACT TCCTACTACG TCCTGAGAAC 
GCAGCTAAGA TCGCACTAGA GATTGGTTAC CCTACTCCAG TGAAAACAGC GCACGCTCTG 
CTACCGAAAG AATTTGCTAA CGATCCAAGC ATCTTCCCAC CACAAGAAGT GATGGACAGC 
GGTACATGGC AAGACGAAGT TGGTGAAGCA AGCGTGCTTT ACGATGAGTA CTTCCAAAAG 
CTAAAAGTAG ACAACTAA
 
Protein sequence
MKSKFYASAL CAATLIATPA MAADQELYFY NWSEYIPNEV LEDFTKETGI KVIYSTYESN 
ESMYAKLKTQ GSGYDLVVPS TYFVSKMRKE GMLQKINKEK LSHFADLDTN FLNKPFDPNN 
NYSIPYIWGA TGIGINADML DKSSVSKWDD FWDSKWEGQL MLMDDSREVF HIALTKLGYS 
PNTTNPDEIK AAYEELKKLM PNVLVFNSDF PANPYLAGEV SLGMLWNGSA YMARQEGANI 
DIIWPEKGTI FWMDSLAIPA GAKNVDAAHK MIDFLLRPEN AAKIALEIGY PTPVKTAHAL 
LPKEFANDPS IFPPQEVMDS GTWQDEVGEA SVLYDEYFQK LKVDN