| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2123 |
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| Symbol | |
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| ID | 5713119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2253645 |
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| End bp | 2254763 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268045 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533460 |
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| Protein GI | 159044666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCA ACCTGATCCG GCCCAGTCGC CGCAGCCTGT TGAAGATGAC CGGCGCCGCG
GCTCTCGCCA CGCCGTTTCT GTCGATCCGT GCCGCCGCGC AAACGACCGA GCTGTCGATG
CTGGCCTGGT ACGGTCATGC CGAGCCCGAC ATCGTCGGCG CCTTCGAAGA GGCCAACAAC
GTCAAGTTCG TCCCGAAATA CTACACCGGC GGCGACAACA TGCTGGGCCT GATCGCCCAG
TCGCCGCGGG GCACCTTCGA TGTGATCCTG TCTGATGCCG AATATGTCCA GCAGCTCAAT
GCCGCTGGCT TCATCGAAGA GCTCGATCCG GCCGATTACG CCTTCGACGA TTTCTTCCCC
GAGTTTCAGA AATTCCCCGG CCACTGGCAG GACGACAAGC TGTTCTCCGT GATCACGCGC
TTCGGGTTTC TCGGCGTCGC CTACAACACC GATGCCTTCA CGGCGGAAGA AGCCTCCAGC
TACGATCTCT TTGCCGACGA GCGTCTGACC GGCAAACTGG GCCATTTCGA CTGGCACCTG
CCCAATCTCG GCCAGATGAG CCTGCATGTG GGCAATGCCA GCCCCTACGA CATCGACGAA
GCGGCCTGGG AGCGCGTGCA GGAGCATACC ATGGGTCTGC GCCGCCAGGC GGGCGGGTTC
TTCGACTATG GCGGCACCTT CTCGTCGCTC GACAACGGCC AGATGCTGGC CTTCGCCGGG
ATCGGCGACT GGATCACCGG CACACTGGAG AAAAACGGCA GCCCCGTGCG CTCCGTCATC
CCGGAACAGG GCGGCCTGCA ATGGACCGAG AGCTTCTCGA TCGGGAAGGG CTCGCGCAAC
CAGGAGATGG CCAAGAAGTG GATCCAGTAC ATCACCTCGC CCGAGGGCCA GGCAAAATCC
GCCGACATGG CCGCATACCC CGCCATCGTG CCGTCGCAGG CTGGCTGGAA AGTGCTCAAC
GACACCAACC CGGCCGAGGC GCGGCGCCAG AACATGGTCC TGGGTGAGCG CAACGCGATG
GACATGATCC GCGAGGGCCT GATCCAGTAT CGCCAGCTCC CGGTTCAGCA GAGCCTGGAG
GACTGGAACG ACTTCTGGTC CGACTACAAA GGCGCCTGA
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| Protein sequence | MPTNLIRPSR RSLLKMTGAA ALATPFLSIR AAAQTTELSM LAWYGHAEPD IVGAFEEANN
VKFVPKYYTG GDNMLGLIAQ SPRGTFDVIL SDAEYVQQLN AAGFIEELDP ADYAFDDFFP
EFQKFPGHWQ DDKLFSVITR FGFLGVAYNT DAFTAEEASS YDLFADERLT GKLGHFDWHL
PNLGQMSLHV GNASPYDIDE AAWERVQEHT MGLRRQAGGF FDYGGTFSSL DNGQMLAFAG
IGDWITGTLE KNGSPVRSVI PEQGGLQWTE SFSIGKGSRN QEMAKKWIQY ITSPEGQAKS
ADMAAYPAIV PSQAGWKVLN DTNPAEARRQ NMVLGERNAM DMIREGLIQY RQLPVQQSLE
DWNDFWSDYK GA
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