| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0910 |
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| Symbol | |
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| ID | 4602123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 857529 |
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| End bp | 858611 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639773689 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_920314 |
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| Protein GI | 119719819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTGA CGAGAAGGCA GTTCCTGGCA TCGCTGGGCG CGGCCGCCGC GCTTGCCAGC
ATAGGGGCGT ACTACTGGAT CTTCCCGAAG CGCGAGGAAA GGGTGCTAAG GGTCTACAAC
TACAGCGCGT ACATAAACCC GGACATTATA AAGGATTTTG AGTCCAAGTA CGGCGTGAAG
GTAATCTACG ACGAGTACGA GTCCGCCGAA GAGGCCTACG CGAAGCTCCA GCTAGGGGGA
GGCGGCTACG ACGTCATAGT GCTCACCGAC CAGTACGTCC CCCAAGCGGT GAAGAAGGGT
TTAGTGGCCC AGCTGGACAA AACGCGTATA CCCAACCTAG GCAACGTGGA CAGAGTTTTC
TTCGAGAACA ACTTCGACCC CGGCCTCAGG TACGCTGTTC CCTACGCGTG GGGTACGACA
GGCATAGGCG TTAACAGGGA CTACGTGGCG GAGGGCGAGA TCGAAGGGTA CGAGCAACTC
TTCGACACGA AAGTCTTCCT GCCGAGGCAC AAGGGAAAGG TCTCCATGCT GGAAGAGTTC
CTCGAAGTCG TCAACGCGGC GAAGCTCTAC CTGGGCATAC CGCTGAACGA CTGGTCCGAG
GAGAGCAAGC AACGCATCAT AGAGCTACTT AGGGAGCAAC GCGACTTCCT CGCCGGCTAC
TACGGCGCTA GCGTCTACAT ACCGGCGCTC GCGAAGGGCG ACCTCCACGC CGCTCACGCG
TGGAGCGGGG ACGTCGTGCA GGCTCAAAGC GAGAACAAGT CCGTAGAGTA CGTTCTGCCG
AAAGAAGGCG CGTTCGTGTG GATCGACTTC ATGGTGATAC CGGTCAACGC GAGGTCGCCG
GACCTGGCGT ACGAGTGGAT AAACTTCCTC CTGGACCCGG CGGTTGCCGC GAAGAACTCC
TCCTACACCT ACTACCCGAG CCCCGTGAAG AGAGAGTTAC TCGAAGGGCT TATAGGCAAG
GACGTGCTGG AGAACCCCGC CGTCTACCCG CCGAGCGGGA CAAAGCTCGT GCAGACTTAC
CCGTTGGACG AAAGCGCCCT CAAAGTAGTC GAGGAGATAA GCACGGCTGT AAAGAGGGTG
TAG
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| Protein sequence | MKLTRRQFLA SLGAAAALAS IGAYYWIFPK REERVLRVYN YSAYINPDII KDFESKYGVK
VIYDEYESAE EAYAKLQLGG GGYDVIVLTD QYVPQAVKKG LVAQLDKTRI PNLGNVDRVF
FENNFDPGLR YAVPYAWGTT GIGVNRDYVA EGEIEGYEQL FDTKVFLPRH KGKVSMLEEF
LEVVNAAKLY LGIPLNDWSE ESKQRIIELL REQRDFLAGY YGASVYIPAL AKGDLHAAHA
WSGDVVQAQS ENKSVEYVLP KEGAFVWIDF MVIPVNARSP DLAYEWINFL LDPAVAAKNS
SYTYYPSPVK RELLEGLIGK DVLENPAVYP PSGTKLVQTY PLDESALKVV EEISTAVKRV
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