More than 300 homologs were found in PanDaTox collection
for query gene Bphy_1081 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_0327  hypothetical protein  57.03 
 
 
634 aa  693    Pseudomonas aeruginosa PA7  Bacteria  normal  0.627098  n/a   
 
 
-
 
NC_002947  PP_2554  4-hydroxyphenylpyruvate dioxygenase  58.61 
 
 
635 aa  717    Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.00914053 
 
 
-
 
NC_012560  Avin_38100  4-hydroxyphenylpyruvate dioxygenase  57.44 
 
 
632 aa  699    Azotobacter vinelandii DJ  Bacteria  normal  0.749235  n/a   
 
 
-
 
NC_004578  PSPTO_2346  4-hydroxyphenylpyruvate dioxygenase, putative  57.69 
 
 
635 aa  730    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3161  4-hydroxyphenylpyruvate dioxygenase  58.61 
 
 
635 aa  717    Pseudomonas putida F1  Bacteria  normal  0.706766  normal 
 
 
-
 
NC_007005  Psyr_2130  4-hydroxyphenylpyruvate dioxygenase  58.16 
 
 
635 aa  734    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0402618  normal  0.678263 
 
 
-
 
NC_007492  Pfl01_4905  4-hydroxyphenylpyruvate dioxygenase  55.68 
 
 
633 aa  690    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0343  4-hydroxyphenylpyruvate dioxygenase  68.67 
 
 
630 aa  848    Burkholderia sp. 383  Bacteria  normal  normal  0.880013 
 
 
-
 
NC_007650  BTH_II2059  4-hydroxyphenylpyruvate dioxygenase, putative  64.24 
 
 
687 aa  809    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5194  4-hydroxyphenylpyruvate dioxygenase  68.99 
 
 
630 aa  846    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0882  4-hydroxyphenylpyruvate dioxygenase  67.68 
 
 
627 aa  820    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.923988 
 
 
-
 
NC_010322  PputGB1_3362  4-hydroxyphenylpyruvate dioxygenase  59.4 
 
 
635 aa  726    Pseudomonas putida GB-1  Bacteria  normal  0.283519  normal  0.789434 
 
 
-
 
NC_008061  Bcen_3062  4-hydroxyphenylpyruvate dioxygenase  69.1 
 
 
630 aa  832    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4567  Xylose isomerase domain protein TIM barrel  67.68 
 
 
627 aa  837    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3418  4-hydroxyphenylpyruvate dioxygenase  69.73 
 
 
630 aa  838    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0242311  normal  0.14685 
 
 
-
 
NC_010515  Bcenmc03_4963  4-hydroxyphenylpyruvate dioxygenase  69.1 
 
 
630 aa  831    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0115166 
 
 
-
 
NC_010622  Bphy_1081  4-hydroxyphenylpyruvate dioxygenase  100 
 
 
628 aa  1276    Burkholderia phymatum STM815  Bacteria  normal  0.796659  normal  0.416218 
 
 
-
 
NC_008391  Bamb_4666  4-hydroxyphenylpyruvate dioxygenase  69.1 
 
 
630 aa  830    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.735725 
 
 
-
 
NC_008463  PA14_03000  hypothetical protein  58.23 
 
 
634 aa  704    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00135939 
 
 
-
 
NC_008543  Bcen2424_5305  4-hydroxyphenylpyruvate dioxygenase  69.1 
 
 
630 aa  832    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.114512 
 
 
-
 
NC_010501  PputW619_2225  4-hydroxyphenylpyruvate dioxygenase  58.86 
 
 
635 aa  739    Pseudomonas putida W619  Bacteria  normal  0.44574  normal 
 
 
-
 
NC_007348  Reut_B5035  4-hydroxyphenylpyruvate dioxygenase  52.63 
 
 
632 aa  619  1e-176  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4496  4-hydroxyphenylpyruvate dioxygenase  50.88 
 
 
638 aa  613  9.999999999999999e-175  Polaromonas sp. JS666  Bacteria  normal  normal  0.460677 
 
 
-
 
NC_012857  Rpic12D_4415  4-hydroxyphenylpyruvate dioxygenase  51.77 
 
 
628 aa  608  9.999999999999999e-173  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0418  xylose isomerase domain-containing protein  50.63 
 
 
635 aa  606  9.999999999999999e-173  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010678  Rpic_4305  4-hydroxyphenylpyruvate dioxygenase  51.77 
 
 
628 aa  608  9.999999999999999e-173  Ralstonia pickettii 12J  Bacteria  normal  0.92924  normal 
 
 
-
 
NC_012791  Vapar_3320  4-hydroxyphenylpyruvate dioxygenase  50 
 
 
630 aa  605  1.0000000000000001e-171  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1560  4-hydroxyphenylpyruvate dioxygenase  48.04 
 
 
632 aa  592  1e-168  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.288895  normal 
 
 
-
 
NC_003296  RS02058  hypothetical protein  50.98 
 
 
626 aa  583  1.0000000000000001e-165  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0224521  normal  0.842888 
 
 
-
 
NC_007963  Csal_0292  4-hydroxyphenylpyruvate dioxygenase  48.96 
 
 
615 aa  578  1e-164  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0606  4-hydroxyphenylpyruvate dioxygenase  46.31 
 
 
624 aa  560  1e-158  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0633938 
 
 
-
 
NC_011894  Mnod_0122  Xylose isomerase domain protein TIM barrel  46.72 
 
 
627 aa  537  1e-151  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.134725  n/a   
 
 
-
 
NC_009485  BBta_6113  4-hydroxyphenylpyruvate dioxygenase  47.11 
 
 
623 aa  525  1e-147  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.471766 
 
 
-
 
NC_010511  M446_4755  4-hydroxyphenylpyruvate dioxygenase  45.81 
 
 
637 aa  513  1e-144  Methylobacterium sp. 4-46  Bacteria  normal  0.304127  normal 
 
 
-
 
NC_009668  Oant_4428  4-hydroxyphenylpyruvate dioxygenase  46.54 
 
 
633 aa  511  1e-143  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4204  xylose isomerase domain-containing protein  44.52 
 
 
629 aa  501  1e-140  Sinorhizobium medicae WSM419  Bacteria  normal  0.460434  normal 
 
 
-
 
NC_012858  Rleg_7092  4-hydroxyphenylpyruvate dioxygenase  44.16 
 
 
631 aa  501  1e-140  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.26168  normal 
 
 
-
 
NC_008254  Meso_0782  4-hydroxyphenylpyruvate dioxygenase  43.72 
 
 
630 aa  490  1e-137  Chelativorans sp. BNC1  Bacteria  normal  0.817905  n/a   
 
 
-
 
NC_011366  Rleg2_5952  4-hydroxyphenylpyruvate dioxygenase  44.62 
 
 
631 aa  489  1e-137  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0955687  decreased coverage  0.00791612 
 
 
-
 
NC_009654  Mmwyl1_3913  xylose isomerase domain-containing protein  42.52 
 
 
617 aa  488  1e-136  Marinomonas sp. MWYL1  Bacteria  normal  0.974395  normal 
 
 
-
 
NC_007794  Saro_1586  4-hydroxyphenylpyruvate dioxygenase  44.09 
 
 
621 aa  481  1e-134  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.435654  n/a   
 
 
-
 
NC_011886  Achl_3855  Xylose isomerase domain protein TIM barrel  42.04 
 
 
624 aa  473  1e-132  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011988  Avi_5449  4-hydroxyphenylpyruvate dioxygenase  44.21 
 
 
615 aa  474  1e-132  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4079  xylose isomerase domain-containing protein  43.46 
 
 
629 aa  474  1e-132  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4090  Xylose isomerase domain protein TIM barrel  43.17 
 
 
645 aa  457  1e-127  Nakamurella multipartita DSM 44233  Bacteria  normal  hitchhiker  0.00816269 
 
 
-
 
NC_013947  Snas_5095  Xylose isomerase domain-containing protein TIM barrel  43.2 
 
 
604 aa  449  1e-125  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0443788 
 
 
-
 
NC_008010  Dgeo_2375  xylose isomerase-like TIM barrel  49.48 
 
 
477 aa  437  1e-121  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0481  AP endonuclease  67.46 
 
 
684 aa  430  1e-119  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0848  putative 4-hydroxyphenylpyruvate dioxygenase  67.46 
 
 
684 aa  430  1e-119  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2205  putative 4-hydroxyphenylpyruvate dioxygenase  67.46 
 
 
684 aa  430  1e-119  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1752  putative 4-hydroxyphenylpyruvate dioxygenase  67.46 
 
 
684 aa  430  1e-119  Burkholderia mallei SAVP1  Bacteria  normal  0.10433  n/a   
 
 
-
 
NC_009079  BMA10247_A0891  AP endonuclease  67.46 
 
 
684 aa  430  1e-119  Burkholderia mallei NCTC 10247  Bacteria  normal  0.940921  n/a   
 
 
-
 
NC_009075  BURPS668_A0577  4-hydroxyphenylpyruvate dioxygenase  67.46 
 
 
687 aa  430  1e-119  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1894  putative amino acid dioxygenase  67.16 
 
 
684 aa  429  1e-118  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1477  Xylose isomerase domain protein TIM barrel  41.03 
 
 
596 aa  376  1e-103  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0230944  normal  0.313669 
 
 
-
 
NC_007484  Noc_1437  4-hydroxyphenylpyruvate dioxygenase  36.39 
 
 
351 aa  211  3e-53  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0248  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  189  2e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.000564922 
 
 
-
 
NC_010508  Bcenmc03_0301  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  189  2e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.000140026 
 
 
-
 
NC_008060  Bcen_2785  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  189  2e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0321  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  189  2e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0240  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  188  3e-46  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0223  4-hydroxyphenylpyruvate dioxygenase  33.82 
 
 
365 aa  187  7e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.376735  hitchhiker  0.0000014808 
 
 
-
 
NC_007510  Bcep18194_A3420  4-hydroxyphenylpyruvate dioxygenase  34.12 
 
 
365 aa  186  2.0000000000000003e-45  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2582  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3784  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia pseudomallei 668  Bacteria  normal  0.205691  n/a   
 
 
-
 
NC_008836  BMA10229_A1975  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.673327  n/a   
 
 
-
 
NC_007434  BURPS1710b_0016  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3120  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.379899  n/a   
 
 
-
 
NC_009076  BURPS1106A_3845  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3528  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0003  4-hydroxyphenylpyruvate dioxygenase  34.41 
 
 
365 aa  183  7e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.809  n/a   
 
 
-
 
NC_010622  Bphy_2866  4-hydroxyphenylpyruvate dioxygenase  33.82 
 
 
365 aa  182  2e-44  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000187167 
 
 
-
 
NC_012856  Rpic12D_3041  4-hydroxyphenylpyruvate dioxygenase  33.53 
 
 
368 aa  181  4.999999999999999e-44  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0286  4-hydroxyphenylpyruvate dioxygenase  33.53 
 
 
365 aa  180  5.999999999999999e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.408126 
 
 
-
 
NC_009511  Swit_3865  4-hydroxyphenylpyruvate dioxygenase  34.83 
 
 
367 aa  180  8e-44  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3388  4-hydroxyphenylpyruvate dioxygenase  33.53 
 
 
368 aa  180  8e-44  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3106  4-hydroxyphenylpyruvate dioxygenase  33.82 
 
 
365 aa  180  8e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3103  4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein  32.95 
 
 
367 aa  177  4e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4766  4-hydroxyphenylpyruvate dioxygenase  32.77 
 
 
375 aa  177  5e-43  Variovorax paradoxus S110  Bacteria  normal  0.578295  n/a   
 
 
-
 
NC_004578  PSPTO_3553  4-hydroxyphenylpyruvate dioxygenase  33.23 
 
 
363 aa  176  9.999999999999999e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.225452  n/a   
 
 
-
 
NC_007005  Psyr_3330  4-hydroxyphenylpyruvate dioxygenase  32.93 
 
 
358 aa  176  9.999999999999999e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.000135901 
 
 
-
 
NC_010681  Bphyt_3671  4-hydroxyphenylpyruvate dioxygenase  32.65 
 
 
365 aa  176  1.9999999999999998e-42  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0292973  hitchhiker  0.0000000943483 
 
 
-
 
NC_012560  Avin_34750  4-hydroxyphenylpyruvate dioxygenase  32.33 
 
 
359 aa  174  2.9999999999999996e-42  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02177  4-hydroxyphenylpyruvate dioxygenase  31.53 
 
 
357 aa  174  3.9999999999999995e-42  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003655  4-hydroxyphenylpyruvate dioxygenase  31.23 
 
 
357 aa  174  5e-42  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4191  4-hydroxyphenylpyruvate dioxygenase  32.37 
 
 
378 aa  170  7e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2917  4-hydroxyphenylpyruvate dioxygenase  31.74 
 
 
358 aa  169  1e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.433802  normal  0.723827 
 
 
-
 
NC_008781  Pnap_1120  4-hydroxyphenylpyruvate dioxygenase  32.04 
 
 
360 aa  169  2e-40  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0960  4-hydroxyphenylpyruvate dioxygenase  30.93 
 
 
369 aa  168  2.9999999999999998e-40  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_53070  4-hydroxyphenylpyruvate dioxygenase  31.83 
 
 
357 aa  168  2.9999999999999998e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4213  4-hydroxyphenylpyruvate dioxygenase  31.98 
 
 
376 aa  168  4e-40  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2137  4-hydroxyphenylpyruvate dioxygenase  32.49 
 
 
377 aa  167  5.9999999999999996e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.658248 
 
 
-
 
NC_010524  Lcho_0434  4-hydroxyphenylpyruvate dioxygenase  31.14 
 
 
358 aa  167  8e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_02541  4-hydroxyphenylpyruvate dioxygenase  29.64 
 
 
357 aa  166  1.0000000000000001e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000129405  n/a   
 
 
-
 
NC_009524  PsycPRwf_1040  4-hydroxyphenylpyruvate dioxygenase  30.65 
 
 
372 aa  166  1.0000000000000001e-39  Psychrobacter sp. PRwf-1  Bacteria  normal  0.53626  normal 
 
 
-
 
NC_002947  PP_3433  4-hydroxyphenylpyruvate dioxygenase  31.74 
 
 
358 aa  165  2.0000000000000002e-39  Pseudomonas putida KT2440  Bacteria  normal  0.954221  normal  0.970213 
 
 
-
 
NC_010501  PputW619_2440  4-hydroxyphenylpyruvate dioxygenase  31.44 
 
 
358 aa  165  2.0000000000000002e-39  Pseudomonas putida W619  Bacteria  normal  0.807767  normal 
 
 
-
 
NC_006369  lpl2204  4-hydroxyphenylpyruvate dioxygenase (legiolysin)  29.91 
 
 
348 aa  164  3e-39  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_2502  4-hydroxyphenylpyruvate dioxygenase  31.74 
 
 
358 aa  165  3e-39  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4501  4-hydroxyphenylpyruvate dioxygenase  30.24 
 
 
359 aa  164  4.0000000000000004e-39  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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