| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2225 |
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| Symbol | |
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| ID | 6111178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2473763 |
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| End bp | 2475670 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622020 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001749094 |
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| Protein GI | 170721406 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.44574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTT CGATAGCCAC CGTGTCCTTG AGCGGCACAC TGCCGGAAAA GCTCGAAGCC
ATCGCCGCCG CCGGTTTCGA CGGCGTCGAG ATCTTCGAGA ATGATCTTCT CTACTATGCC
GGCAGCCCCC GCGAAGTGCG GCAGATGTGC GCTGACCTCG GTATCGCCAT CACCCTATTC
CAGCCGTTCC GCGATTTTGA AGGCTGCCGC CGCGACCGCC TGCAGAAGAA CATCGACCGC
GCCGAGCGCA AGTTCGACCT GATGCAAGAG CTGGGCACCG ACCTGGTGCT GGTGTGCAGC
AACGTGCAGG CCGACGCCCT GGGCGAAGAA CAACTGCTGG TGGACGACCT GCGCCTGCTC
GCTGAGCACG CCGGCCAACG CGGCATGCGC ATCGGCTACG AAGCCTTGGC ATGGGGGCGT
CACGTCAACA CCTATCAGCA AGTGTGGAAC CTGGTGCGCC AGGCCGACCA CCCGGCGCTG
GGCGTTATCC TCGACAGCTT CCACACCCTG TCGCTCAAAG GTGACCCTGC CGCGATCCGC
GATATCCCCG GCGACAAGAT CTTCTTCGTG CAGATGGCCG ACGCACCGAT CCTGGCCATG
GATGTGCTGG AGTGGAGTCG CCACTTCCGC TGTTTCCCTG GGCAGGGCGA AATGGACCTG
GCCGGCTTCC TCGCGCCGAT CCTGGCCACC GGTTATCGTG GCCCGTTGTC GCTGGAAATC
TTCAACGACG GCTTCCGCGC TGCACCACCG CGCCAGAACG CCGCCGATGG CCTGCGTTCG
CTGTTGTACC TGGAAGAACA GACCCGCCTG CGCCTGCAGC AGGAGGGCAC CGCCATCGAG
CCGGGTGTGC TGTTCGCACC GCCTGCCGCG AGTACCTACG ACGGTGTGGA ATTCCTCGAA
TTTGCCGTCG ACGAAGCGGT CGGCGCGCGT CTGGGCAGCT GGCTCAAGCG CCTGGGCTTT
GCCGACGCCG GCAAGCACCG CAGCAAGGAT GTACGCCTGC TACGCCAGAA CGACATCAAC
ATCGTGCTCA ACGCCGAGCC CTACTCCTTT GGCCACAACT TCTTCGAGGC CCACGGCCCA
TCGTTGTGCG CCACCGCGCT GCGGGTCAAG GACGAGCACG CGGCGCTGCA GCGCGCCACC
GACTTCCGCG GCCAGCCGTT CCGCGGGCTG GTCGGCCCCA ACGAATGTGA GGTGCCTGCA
GTACGCGCCC CGGATGGCAG CCTGATCTAC CTGGTGGAGC AGGGCAAGGA AGGCCCGTCG
CTGTACGACA CCGACTTCCG CCTGGACCAG AGCGCCAGCA GCACCGGTGG CCTGCAGCGC
ATCGACCACA TGGCCCTGGC CTTGCCAGCC GAGTCGCTGG ACAGCTGGGT GCTGTTCTAC
AAGAGCCTGT TCGACTTTGC CGCAGATGAT GAAGTGGTAT TGCCCGACCC GTACGGCCTG
GTCAAAAGCC GTGCCCTGCG CAGCCAGTGC GGCAGCCTGC GCCTGCCGCT GAACATCTCG
GAGAACCGCA ACACCGCCAT CGCTCATGCG CTGTCGAGCT ATCGCGGGTC GGGTGTTCAC
CATATCGCCT TCGATTGTGC CGACATCTTC AAGGAAGTGG CCCGAGCGAA GGAAGCCGGT
GTGCCGTTGC TGGAGATTCC GCTCAATTAT TACGACGATC TGGCGGCTCG TTTCGATTTC
GACGACGAGT TCCTCAGCGA GCTGGCGTAC TACAACGTGC TGTATGACCG CGACGCTCAG
GGTGGCGAGC TGTTCCACGT ATACACCGAG GCGTTCGAGG ACCGGTTCTT CTTTGAAATC
ATCCAGCGCA AGGGGGGGTA TGCCGGGTAC GGTGCGGCCA ACGTTCCTGT GCGGTTGGCG
GCGATGGCCA AGCGGCGCAG CGGAGCGGCG CGCAAGCCGG TGTTGTAA
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| Protein sequence | MQRSIATVSL SGTLPEKLEA IAAAGFDGVE IFENDLLYYA GSPREVRQMC ADLGIAITLF
QPFRDFEGCR RDRLQKNIDR AERKFDLMQE LGTDLVLVCS NVQADALGEE QLLVDDLRLL
AEHAGQRGMR IGYEALAWGR HVNTYQQVWN LVRQADHPAL GVILDSFHTL SLKGDPAAIR
DIPGDKIFFV QMADAPILAM DVLEWSRHFR CFPGQGEMDL AGFLAPILAT GYRGPLSLEI
FNDGFRAAPP RQNAADGLRS LLYLEEQTRL RLQQEGTAIE PGVLFAPPAA STYDGVEFLE
FAVDEAVGAR LGSWLKRLGF ADAGKHRSKD VRLLRQNDIN IVLNAEPYSF GHNFFEAHGP
SLCATALRVK DEHAALQRAT DFRGQPFRGL VGPNECEVPA VRAPDGSLIY LVEQGKEGPS
LYDTDFRLDQ SASSTGGLQR IDHMALALPA ESLDSWVLFY KSLFDFAADD EVVLPDPYGL
VKSRALRSQC GSLRLPLNIS ENRNTAIAHA LSSYRGSGVH HIAFDCADIF KEVARAKEAG
VPLLEIPLNY YDDLAARFDF DDEFLSELAY YNVLYDRDAQ GGELFHVYTE AFEDRFFFEI
IQRKGGYAGY GAANVPVRLA AMAKRRSGAA RKPVL
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