| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2502 |
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| Symbol | |
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| ID | 5870291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2807915 |
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| End bp | 2808991 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641547625 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001668737 |
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| Protein GI | 167033506 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA TCTTCGACAA TCCAATGGGC CTGATGGGCT TCGAATTCAT CGAACTGGCT
TCGCCGACCC CTGGCGTACT TGAGCCGGTC TTCCAGATAC TGGGTTTCAC CAAGGTGGCT
ACCCACCGCT CCAAGGATGT ACACCTCTAC CGTCAGGGTG GCATCAATCT GATTTTGAAC
AACGAGCCCA AGAGCATCGC CTCGTATTTC GCGGCTGAGC ACGGCCCGTC TGTCTGTGGT
ATGGCATTCC GTGTACGCAA TGCCCATGAA GCCTATGCCC GTGCCCTCGA ATTGGGCGCC
CAGCCGGTGG AAATCGAAAC CGGCCCGATG GAACTGCGTC TGCCAGCGAT CAAGGGTATT
GGTGGCGCAC CGCTTTACCT GATCGACCGT TTCGAGGAAG GCAGCTCGAT CTACGACATC
GACTTCAACT TCATCGAAGG CGTGGATCGC AACCCGGTGG GCGCCGGCCT GAAAATCATC
GACCACCTCA CCCACAACGT CTACCGCGGA CGCATGGCCT ACTGGGCCGG CTTCTACGAG
AAGCTGTTCA ACTTCCGTGA AATCCGTTAC TTCGATATCA AGGGTGAGTA CACCGGCCTG
ACGTCCAAGG CCATGACCGC TCCTGATGGC ATGATCCGCA TCCCGCTCAA CGAAGAGTCC
TCCAAGGGTG CCGGGCAGAT CGAAGAGTTC CTGATGCAGT TCAACGGCGA AGGCATCCAG
CACGTGGCCT TCCTGACTGA TGACCTGCTC AAGACCTGGG ATGCCCTGAA GGGCTTCGGT
ATGCGCTTCA TGACCGCGCC ACCGCAAACC TACTACGAAA TGCTCGAAGA GCGCCTGCCT
GGTCACGGCG AGCCGGTCGA TCAACTGCAA GCGCGTGGCA TCCTTCTCGA TGGCGCCTCG
CAGCCCGGCG ACAAGCGCCT GCTGCTGCAG ATTTTCTCGG AAACCTTGCT TGGGCCGGTG
TTCTTCGAGT TCATCCAGCG CAAAGGTGAC GACGGTTTTG GTGAAGGCAA CTTCAAGGCA
TTGTTCGAAT CCATCGAACG GGACCAAGTT CGCCGTGGTG TACTGAGCAC CGACTGA
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| Protein sequence | MADIFDNPMG LMGFEFIELA SPTPGVLEPV FQILGFTKVA THRSKDVHLY RQGGINLILN
NEPKSIASYF AAEHGPSVCG MAFRVRNAHE AYARALELGA QPVEIETGPM ELRLPAIKGI
GGAPLYLIDR FEEGSSIYDI DFNFIEGVDR NPVGAGLKII DHLTHNVYRG RMAYWAGFYE
KLFNFREIRY FDIKGEYTGL TSKAMTAPDG MIRIPLNEES SKGAGQIEEF LMQFNGEGIQ
HVAFLTDDLL KTWDALKGFG MRFMTAPPQT YYEMLEERLP GHGEPVDQLQ ARGILLDGAS
QPGDKRLLLQ IFSETLLGPV FFEFIQRKGD DGFGEGNFKA LFESIERDQV RRGVLSTD
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