Gene Bamb_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0240 
Symbol 
ID4311480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp280402 
End bp281499 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID638148019 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_772134 
Protein GI115350295 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCC CCAACTGGGA GAACCCCGTC GGCACCGACG GCTTCGAATT CATCGAATAC 
ACCGCACCGG ATCCGAAAGC GCTCGGACAG CTGTTCGAGC GGATGGGTTT CACCGCGATC 
GCACGCCATC GCCACAAGGA CGTGACGGTC TACCGCCAGG GCGACATCAA CTTCATCATC 
AACGCCGAAC CCGATTCGTT CGCTCAACGC TTCGCGCGCC TGCACGGCCC GTCGATCTGC 
GCGATCGCGT TCCGCGTGCA GGACGCCGCG AAGGCGTACC AGCACGCGCT CGACCTCGGC 
GCGTGGGGCT TCGACAACAA GACGGGCCCG ATGGAGCTGA ACATCCCGGC GATCAAGGGC 
ATCGGCGATT CGCTGATCTA TTTCGTCGAC CGCTGGCGCG GCAAGAACGG CGCGCAGCCG 
GGTGCGATCG GCGACATCTC CATCTATGAC GTCGACTTCG AGCCGATCGC CGGCGCGAAC 
CCGAACCCGG TCGGCCACGG CCTCACCTAC ATCGACCACC TGACGCACAA CGTGCATCGC 
GGCCGCATGC GGGAATGGGC CGAGTTCTAC GAGCGCCTGT TCAACTTCCG CGAAGTGCGC 
TACTTCGACA TCGAAGGCAA GGTGACGGGC GTGAAGTCGA AGGCGATGAC GTCGCCGTGC 
GGCAAGATCC GGATCCCGAT CAACGAGGAA GGCTCGGACA CGGCCGGCCA GATCCAGGAA 
TACCTCGACG CGTATCACGG CGAAGGGATC CAGCACATCG CGCTCGGCAC GAACGACATC 
TACCGCGCGG TCGACGGCCT GCGCGGCAAG GAAGTGAAGC TGCTCGACAC GATCGACACG 
TATTACGAGC TGGTCGACCG TCGCGTGCCG AACCACGGCG AATCGCTCGA CGAGCTGAAG 
AAGCGCAAGA TCCTGATCGA CGGCGCCCGC GACGACCTGC TGCTGCAGAT CTTCACCGAG 
AACCAGATCG GCCCGATCTT CTTCGAGATC ATTCAGCGCA AGGGCAACCA GGGCTTCGGC 
GAAGGCAACT TCAAGGCGCT GTTCGAATCG ATCGAGCTCG ACCAGATCCG CCGCGGCGTG 
GTTCAGGACA AGGCCTGA
 
Protein sequence
MQIPNWENPV GTDGFEFIEY TAPDPKALGQ LFERMGFTAI ARHRHKDVTV YRQGDINFII 
NAEPDSFAQR FARLHGPSIC AIAFRVQDAA KAYQHALDLG AWGFDNKTGP MELNIPAIKG 
IGDSLIYFVD RWRGKNGAQP GAIGDISIYD VDFEPIAGAN PNPVGHGLTY IDHLTHNVHR 
GRMREWAEFY ERLFNFREVR YFDIEGKVTG VKSKAMTSPC GKIRIPINEE GSDTAGQIQE 
YLDAYHGEGI QHIALGTNDI YRAVDGLRGK EVKLLDTIDT YYELVDRRVP NHGESLDELK 
KRKILIDGAR DDLLLQIFTE NQIGPIFFEI IQRKGNQGFG EGNFKALFES IELDQIRRGV 
VQDKA