| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5095 |
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| Symbol | |
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| ID | 8886303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5411698 |
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| End bp | 5413512 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Xylose isomerase domain-containing protein TIM barrel |
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| Protein accession | YP_003513823 |
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| Protein GI | 291302545 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0443788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACA ACGCTCCCCG CCACCGAAGG GGAATCGCGA CCGTCTGCCT GTCGGGAACC
ATCGAGGACA AACTGCTGGC CGCCGCCGAG GCTGGTTTCG ACGGTGTGGA GATCTTCGAG
AACGACCTGC TCGCCACGTC CCAGACCCCC GAACAGCTCC GGGACCGCTG CCGCGACCTG
GGGCTGCGCA TCGACCTGTA CCAGCCGTTC CGGGACTTCG AGGCCGCACC GCCACCCCGT
CTAGCCGCCA ACCTGCGCCG CGCCGAGCAC AAGTTCGACC TCATGGAGCG GCTCGGCGTC
GACACGGTGC TGGTGTGTTC CTCGGTCGCC CCCGACACCG TCGACGATGA CGACCTTGCC
GCCGAACAAC TACACGCGCT CGCCGAACGC GCCGCGAAGC GCGGCATCCG CATCGCCTAC
GAGGCGCTGG CCTGGGGAAG GTTCGTCAAC ACCTACAGCC ACTCGTGGGA CATCGTCGCC
CGCGCCGATC ATCCCGCGCT GGGCCTGTGC CTGGACAGTT TCCACATCCT CTCGCGCGCC
AGCGATCCAG CGGGTATCGC CGACATCCCC GGCGAGAAGC TGTTCTTCCT GCAACTGGCG
GACGCACCGA GCCTGCGCAT GGACCCACTA CAGTGGAGCA GGCATCATCG AGTGTTCCCC
GGGCAGGGGA ACTTCGACTT GAAGCGCTTC CTCGGGTACG TACTGGACGC CGGGTACGAC
GGACCGCTGT CCCTTGAGGT CTTCAACGAC GTGTACCGAC AGGCCGATCC GCGTTGCACC
GCTGTGGACG CCATGCGATC GCTTGTCGCT CTTGAGGAGT CCGTCGGTGT GCCGCTGCCC
GCGCCGCCTC GGCTCACCGG TCATGCGTTC ACGGAGCTGA CCGTGGACGA GCCGACGCAA
GCGCGGCTCG CCGATACGCT TACGGCCCTT GGCTTCACGC TCACCGGCCA TCACCGCGAG
AGCCCCGTGG AGCTGTGGGA GCAGAACGCG ATCCGCGTAC TCGTCAACCG CGGCTCGTCG
TCGGGCGGCG GTGCGGGCAT CAGTTCGCTG GCCGTCGAGA GCAGTGACCC TGTCGCGTCA
GCGCGGCGGG CCGAAGCGCT GCTGGCCCCC GTGCACACGC CCGATGCGGC CATGCCCGCT
GTCACGGCGC CCGACGGCTC GCGGATCGTC TTCTGTGGAC CAGGCGAAGC CTGGCGGGAC
CGGTTCCGGC CGTCCAGCGA AGCGAGTCGA GCTGAAGGTG GACTCACCCA CGTCGACCAC
ATTGCCCTGA CCCAGCCCTT CGACCACTTC GACGAAGCCG CGCTCTTCCT CCACTCGGTC
CTCGGCCTCG ACACAGAGGA CAACACCGAA TACGCCGCCC CGTTCGGGCT CGTCCGCGCC
CGCGCTCTCA GCGACCCCGG CCACCACGTC CGCATCGCCC TCAGCGTCGC GCTCATCCGC
CGAGGCGAGG AGTGGTCCCC CGGAGTCCCC GCGCCCCAAC ACATCGCCTT CGCCACCGAC
GACATCTTCA CCGTGGCCAC GACGCTGCGA ACCGCGGGCG CACCGCCACT CCCCATCCCC
GACAACTACT ACGACGACCT CGACGCCCGG CTCGCCCCGC TTCGGCTGGC CGATCTCCGC
GAACACCACA CCCTCTACGA CCGCGACAAC GACGGCGAAT TCCTGCACCT GTACACGCCA
GTCCTCGGCG ATCGAGTGTT CTTCGAAGTG TGCCAACGCA TCGGCGGCTA CCTCGGCTAC
GGCACCGCCA ACACACCGAT CCGGATGGCC GCGCACCGCC AACAACGGCT CGCGGCCCGC
AGCGCCGCCG CGTGA
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| Protein sequence | MPDNAPRHRR GIATVCLSGT IEDKLLAAAE AGFDGVEIFE NDLLATSQTP EQLRDRCRDL
GLRIDLYQPF RDFEAAPPPR LAANLRRAEH KFDLMERLGV DTVLVCSSVA PDTVDDDDLA
AEQLHALAER AAKRGIRIAY EALAWGRFVN TYSHSWDIVA RADHPALGLC LDSFHILSRA
SDPAGIADIP GEKLFFLQLA DAPSLRMDPL QWSRHHRVFP GQGNFDLKRF LGYVLDAGYD
GPLSLEVFND VYRQADPRCT AVDAMRSLVA LEESVGVPLP APPRLTGHAF TELTVDEPTQ
ARLADTLTAL GFTLTGHHRE SPVELWEQNA IRVLVNRGSS SGGGAGISSL AVESSDPVAS
ARRAEALLAP VHTPDAAMPA VTAPDGSRIV FCGPGEAWRD RFRPSSEASR AEGGLTHVDH
IALTQPFDHF DEAALFLHSV LGLDTEDNTE YAAPFGLVRA RALSDPGHHV RIALSVALIR
RGEEWSPGVP APQHIAFATD DIFTVATTLR TAGAPPLPIP DNYYDDLDAR LAPLRLADLR
EHHTLYDRDN DGEFLHLYTP VLGDRVFFEV CQRIGGYLGY GTANTPIRMA AHRQQRLAAR
SAAA
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