More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5952 on replicon NC_011366
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6113  4-hydroxyphenylpyruvate dioxygenase  54.3 
 
 
623 aa  677    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.471766 
 
 
-
 
NC_009620  Smed_4204  xylose isomerase domain-containing protein  65.77 
 
 
629 aa  832    Sinorhizobium medicae WSM419  Bacteria  normal  0.460434  normal 
 
 
-
 
NC_011366  Rleg2_5952  4-hydroxyphenylpyruvate dioxygenase  100 
 
 
631 aa  1280    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0955687  decreased coverage  0.00791612 
 
 
-
 
NC_009668  Oant_4428  4-hydroxyphenylpyruvate dioxygenase  74.68 
 
 
633 aa  949    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5449  4-hydroxyphenylpyruvate dioxygenase  63.58 
 
 
615 aa  806    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4755  4-hydroxyphenylpyruvate dioxygenase  55.03 
 
 
637 aa  697    Methylobacterium sp. 4-46  Bacteria  normal  0.304127  normal 
 
 
-
 
NC_008254  Meso_0782  4-hydroxyphenylpyruvate dioxygenase  70.27 
 
 
630 aa  894    Chelativorans sp. BNC1  Bacteria  normal  0.817905  n/a   
 
 
-
 
NC_011894  Mnod_0122  Xylose isomerase domain protein TIM barrel  56.73 
 
 
627 aa  717    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.134725  n/a   
 
 
-
 
NC_012858  Rleg_7092  4-hydroxyphenylpyruvate dioxygenase  94.44 
 
 
631 aa  1213    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.26168  normal 
 
 
-
 
NC_007794  Saro_1586  4-hydroxyphenylpyruvate dioxygenase  50.81 
 
 
621 aa  617  1e-175  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.435654  n/a   
 
 
-
 
NC_013946  Mrub_0606  4-hydroxyphenylpyruvate dioxygenase  48.63 
 
 
624 aa  609  1e-173  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0633938 
 
 
-
 
NC_007963  Csal_0292  4-hydroxyphenylpyruvate dioxygenase  49.68 
 
 
615 aa  603  1.0000000000000001e-171  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5035  4-hydroxyphenylpyruvate dioxygenase  47.98 
 
 
632 aa  558  1e-158  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4305  4-hydroxyphenylpyruvate dioxygenase  47.88 
 
 
628 aa  555  1e-157  Ralstonia pickettii 12J  Bacteria  normal  0.92924  normal 
 
 
-
 
NC_012857  Rpic12D_4415  4-hydroxyphenylpyruvate dioxygenase  47.88 
 
 
628 aa  555  1e-157  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2554  4-hydroxyphenylpyruvate dioxygenase  47.6 
 
 
635 aa  550  1e-155  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.00914053 
 
 
-
 
NC_004578  PSPTO_2346  4-hydroxyphenylpyruvate dioxygenase, putative  46.01 
 
 
635 aa  551  1e-155  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3161  4-hydroxyphenylpyruvate dioxygenase  47.6 
 
 
635 aa  550  1e-155  Pseudomonas putida F1  Bacteria  normal  0.706766  normal 
 
 
-
 
NC_010501  PputW619_2225  4-hydroxyphenylpyruvate dioxygenase  46.41 
 
 
635 aa  550  1e-155  Pseudomonas putida W619  Bacteria  normal  0.44574  normal 
 
 
-
 
NC_007005  Psyr_2130  4-hydroxyphenylpyruvate dioxygenase  46.02 
 
 
635 aa  548  1e-154  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0402618  normal  0.678263 
 
 
-
 
NC_010322  PputGB1_3362  4-hydroxyphenylpyruvate dioxygenase  47.44 
 
 
635 aa  547  1e-154  Pseudomonas putida GB-1  Bacteria  normal  0.283519  normal  0.789434 
 
 
-
 
NC_003296  RS02058  hypothetical protein  48.27 
 
 
626 aa  536  1e-151  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0224521  normal  0.842888 
 
 
-
 
NC_007492  Pfl01_4905  4-hydroxyphenylpyruvate dioxygenase  45.77 
 
 
633 aa  536  1e-151  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3320  4-hydroxyphenylpyruvate dioxygenase  44.13 
 
 
630 aa  533  1e-150  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_03000  hypothetical protein  47.22 
 
 
634 aa  533  1e-150  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00135939 
 
 
-
 
NC_009656  PSPA7_0327  hypothetical protein  46.58 
 
 
634 aa  530  1e-149  Pseudomonas aeruginosa PA7  Bacteria  normal  0.627098  n/a   
 
 
-
 
NC_012560  Avin_38100  4-hydroxyphenylpyruvate dioxygenase  46.06 
 
 
632 aa  524  1e-147  Azotobacter vinelandii DJ  Bacteria  normal  0.749235  n/a   
 
 
-
 
NC_009654  Mmwyl1_3913  xylose isomerase domain-containing protein  42.97 
 
 
617 aa  501  1e-140  Marinomonas sp. MWYL1  Bacteria  normal  0.974395  normal 
 
 
-
 
NC_007948  Bpro_4496  4-hydroxyphenylpyruvate dioxygenase  43.87 
 
 
638 aa  500  1e-140  Polaromonas sp. JS666  Bacteria  normal  normal  0.460677 
 
 
-
 
NC_008781  Pnap_1560  4-hydroxyphenylpyruvate dioxygenase  43.69 
 
 
632 aa  500  1e-140  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.288895  normal 
 
 
-
 
NC_010622  Bphy_1081  4-hydroxyphenylpyruvate dioxygenase  44.62 
 
 
628 aa  495  9.999999999999999e-139  Burkholderia phymatum STM815  Bacteria  normal  0.796659  normal  0.416218 
 
 
-
 
NC_010524  Lcho_0418  xylose isomerase domain-containing protein  43.15 
 
 
635 aa  493  9.999999999999999e-139  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B0882  4-hydroxyphenylpyruvate dioxygenase  44.93 
 
 
627 aa  494  9.999999999999999e-139  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.923988 
 
 
-
 
NC_010676  Bphyt_4567  Xylose isomerase domain protein TIM barrel  44.44 
 
 
627 aa  489  1e-137  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0343  4-hydroxyphenylpyruvate dioxygenase  42.06 
 
 
630 aa  470  1.0000000000000001e-131  Burkholderia sp. 383  Bacteria  normal  normal  0.880013 
 
 
-
 
NC_010552  BamMC406_5194  4-hydroxyphenylpyruvate dioxygenase  42.38 
 
 
630 aa  472  1.0000000000000001e-131  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3418  4-hydroxyphenylpyruvate dioxygenase  42.83 
 
 
630 aa  464  1e-129  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0242311  normal  0.14685 
 
 
-
 
NC_008391  Bamb_4666  4-hydroxyphenylpyruvate dioxygenase  42.67 
 
 
630 aa  463  1e-129  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.735725 
 
 
-
 
NC_010515  Bcenmc03_4963  4-hydroxyphenylpyruvate dioxygenase  42.02 
 
 
630 aa  454  1.0000000000000001e-126  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0115166 
 
 
-
 
NC_008061  Bcen_3062  4-hydroxyphenylpyruvate dioxygenase  42.02 
 
 
630 aa  454  1.0000000000000001e-126  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5305  4-hydroxyphenylpyruvate dioxygenase  42.02 
 
 
630 aa  454  1.0000000000000001e-126  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.114512 
 
 
-
 
NC_006349  BMAA0848  putative 4-hydroxyphenylpyruvate dioxygenase  39.1 
 
 
684 aa  421  1e-116  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2205  putative 4-hydroxyphenylpyruvate dioxygenase  39.1 
 
 
684 aa  421  1e-116  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0891  AP endonuclease  39.1 
 
 
684 aa  421  1e-116  Burkholderia mallei NCTC 10247  Bacteria  normal  0.940921  n/a   
 
 
-
 
NC_008784  BMASAVP1_1752  putative 4-hydroxyphenylpyruvate dioxygenase  39.1 
 
 
684 aa  421  1e-116  Burkholderia mallei SAVP1  Bacteria  normal  0.10433  n/a   
 
 
-
 
NC_013947  Snas_5095  Xylose isomerase domain-containing protein TIM barrel  40.71 
 
 
604 aa  417  9.999999999999999e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0443788 
 
 
-
 
NC_011886  Achl_3855  Xylose isomerase domain protein TIM barrel  38.74 
 
 
624 aa  396  1e-109  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4090  Xylose isomerase domain protein TIM barrel  39.53 
 
 
645 aa  395  1e-108  Nakamurella multipartita DSM 44233  Bacteria  normal  hitchhiker  0.00816269 
 
 
-
 
NC_008010  Dgeo_2375  xylose isomerase-like TIM barrel  46.15 
 
 
477 aa  391  1e-107  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4079  xylose isomerase domain-containing protein  38.51 
 
 
629 aa  387  1e-106  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0481  AP endonuclease  36.98 
 
 
684 aa  375  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1894  putative amino acid dioxygenase  36.83 
 
 
684 aa  374  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1477  Xylose isomerase domain protein TIM barrel  39.71 
 
 
596 aa  343  7e-93  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0230944  normal  0.313669 
 
 
-
 
NC_007650  BTH_II2059  4-hydroxyphenylpyruvate dioxygenase, putative  49.84 
 
 
687 aa  286  7e-76  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0577  4-hydroxyphenylpyruvate dioxygenase  52.19 
 
 
687 aa  270  8e-71  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1437  4-hydroxyphenylpyruvate dioxygenase  33.23 
 
 
351 aa  178  2e-43  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3865  4-hydroxyphenylpyruvate dioxygenase  33.53 
 
 
367 aa  177  4e-43  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3330  4-hydroxyphenylpyruvate dioxygenase  33.24 
 
 
358 aa  166  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.000135901 
 
 
-
 
NC_010515  Bcenmc03_5960  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
375 aa  164  5.0000000000000005e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4191  4-hydroxyphenylpyruvate dioxygenase  31.87 
 
 
378 aa  164  6e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0570  4-hydroxyphenylpyruvate dioxygenase  32.93 
 
 
372 aa  162  1e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.150447  normal 
 
 
-
 
NC_004578  PSPTO_3553  4-hydroxyphenylpyruvate dioxygenase  32.66 
 
 
363 aa  162  2e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.225452  n/a   
 
 
-
 
NC_010524  Lcho_3692  xylose isomerase domain-containing protein  35.04 
 
 
305 aa  162  2e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008061  Bcen_3972  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
375 aa  162  2e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_53070  4-hydroxyphenylpyruvate dioxygenase  33.64 
 
 
357 aa  162  2e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4395  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
375 aa  162  2e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.83775  normal  0.881765 
 
 
-
 
NC_010676  Bphyt_6758  4-hydroxyphenylpyruvate dioxygenase  33.71 
 
 
377 aa  161  4e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.39131 
 
 
-
 
NC_011004  Rpal_0005  4-hydroxyphenylpyruvate dioxygenase  32.62 
 
 
372 aa  160  5e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1656  xylose isomerase domain-containing protein  36.16 
 
 
297 aa  160  7e-38  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.876977 
 
 
-
 
NC_009439  Pmen_1696  4-hydroxyphenylpyruvate dioxygenase  33.64 
 
 
360 aa  160  8e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.141185 
 
 
-
 
NC_007492  Pfl01_2917  4-hydroxyphenylpyruvate dioxygenase  32.53 
 
 
358 aa  160  9e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.433802  normal  0.723827 
 
 
-
 
NC_007650  BTH_II1222  4-hydroxyphenylpyruvate dioxygenase  34.2 
 
 
381 aa  159  1e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2773  4-hydroxyphenylpyruvate dioxygenase  33.14 
 
 
377 aa  159  1e-37  Burkholderia xenovorans LB400  Bacteria  normal  0.0648229  normal 
 
 
-
 
NC_008391  Bamb_3806  4-hydroxyphenylpyruvate dioxygenase  33.14 
 
 
375 aa  159  1e-37  Burkholderia ambifaria AMMD  Bacteria  normal  0.992109  normal  0.647251 
 
 
-
 
NC_010552  BamMC406_4274  4-hydroxyphenylpyruvate dioxygenase  33.14 
 
 
375 aa  159  2e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.217947 
 
 
-
 
NC_010623  Bphy_3887  4-hydroxyphenylpyruvate dioxygenase  32.78 
 
 
375 aa  158  3e-37  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4213  4-hydroxyphenylpyruvate dioxygenase  31.04 
 
 
376 aa  157  4e-37  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4226  4-hydroxyphenylpyruvate dioxygenase  33.63 
 
 
375 aa  158  4e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.453133  normal 
 
 
-
 
NC_010622  Bphy_2866  4-hydroxyphenylpyruvate dioxygenase  31.53 
 
 
365 aa  158  4e-37  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000187167 
 
 
-
 
NC_010678  Rpic_4300  4-hydroxyphenylpyruvate dioxygenase  33.61 
 
 
357 aa  157  5.0000000000000005e-37  Ralstonia pickettii 12J  Bacteria  normal  0.449166  normal 
 
 
-
 
NC_012857  Rpic12D_4410  4-hydroxyphenylpyruvate dioxygenase  33.61 
 
 
357 aa  157  5.0000000000000005e-37  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2329  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
358 aa  157  6e-37  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2042  4-hydroxyphenylpyruvate dioxygenase  33.94 
 
 
358 aa  157  6e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0443757 
 
 
-
 
NC_010002  Daci_4442  xylose isomerase domain-containing protein  34.94 
 
 
298 aa  156  1e-36  Delftia acidovorans SPH-1  Bacteria  normal  0.481875  normal  0.31172 
 
 
-
 
NC_012912  Dd1591_4234  4-hydroxyphenylpyruvate dioxygenase  34.55 
 
 
362 aa  156  1e-36  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2440  4-hydroxyphenylpyruvate dioxygenase  33.73 
 
 
358 aa  155  1e-36  Pseudomonas putida W619  Bacteria  normal  0.807767  normal 
 
 
-
 
NC_008825  Mpe_A0346  4-hydroxyphenylpyruvate dioxygenase  33.24 
 
 
370 aa  156  1e-36  Methylibium petroleiphilum PM1  Bacteria  normal  0.152583  normal 
 
 
-
 
NC_010524  Lcho_0434  4-hydroxyphenylpyruvate dioxygenase  32.85 
 
 
358 aa  156  1e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_3433  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
358 aa  155  2e-36  Pseudomonas putida KT2440  Bacteria  normal  0.954221  normal  0.970213 
 
 
-
 
NC_007348  Reut_B4501  4-hydroxyphenylpyruvate dioxygenase  34.5 
 
 
359 aa  155  2e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1625  4-hydroxyphenylpyruvate dioxygenase  32.26 
 
 
375 aa  155  2e-36  Burkholderia sp. 383  Bacteria  hitchhiker  0.00509594  normal  0.33817 
 
 
-
 
NC_012791  Vapar_4766  4-hydroxyphenylpyruvate dioxygenase  31.36 
 
 
375 aa  155  2.9999999999999998e-36  Variovorax paradoxus S110  Bacteria  normal  0.578295  n/a   
 
 
-
 
NC_010322  PputGB1_2502  4-hydroxyphenylpyruvate dioxygenase  33.43 
 
 
358 aa  155  2.9999999999999998e-36  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2137  4-hydroxyphenylpyruvate dioxygenase  31.51 
 
 
377 aa  154  4e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.658248 
 
 
-
 
NC_007969  Pcryo_1555  4-hydroxyphenylpyruvate dioxygenase  33.33 
 
 
368 aa  154  4e-36  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00563664  normal 
 
 
-
 
NC_007948  Bpro_1854  xylose isomerase-like TIM barrel  34.93 
 
 
297 aa  154  5e-36  Polaromonas sp. JS666  Bacteria  normal  0.151277  normal  0.216619 
 
 
-
 
NC_010682  Rpic_3388  4-hydroxyphenylpyruvate dioxygenase  32.47 
 
 
368 aa  154  5e-36  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2997  4-hydroxyphenylpyruvate dioxygenase  30.79 
 
 
360 aa  153  8e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.171273  n/a   
 
 
-
 
NC_010084  Bmul_0223  4-hydroxyphenylpyruvate dioxygenase  31.14 
 
 
365 aa  153  8e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.376735  hitchhiker  0.0000014808 
 
 
-
 
NC_012856  Rpic12D_3041  4-hydroxyphenylpyruvate dioxygenase  32.47 
 
 
368 aa  153  1e-35  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
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