| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3865 |
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| Symbol | |
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| ID | 5199366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4255411 |
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| End bp | 4256514 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583420 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001264348 |
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| Protein GI | 148556766 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACTAT CTCAAGAGGC TGCCATGACC GACACCGCCA TCGAACCGCA TCACAACCCG
CTGGGCCTCG ACGGTTTCGA GTTCGTCGAG TTCACCGGCC CCGATCCTCT GGCGCTCGCC
GCGCTGTTCG AGGCGATGGG CTTCACCCAT CTCGGCGACC ACCGGTCGAA GAACGTCCGC
CGCTACCAGC AGGGCGACGT CAACTTCATC CTCAACATGG ACAAGGGCGG CCAGGCCGCC
GACTTCCGCG CCGCGCACGG CCCCTCGGCC AACGCCATGG CGTTCCGCGT CCATGACGCC
GCCAAGGCGC TCGAAAAGGC GGTCGCGCGC GGCGCGACCC CGGTCGAAGG ACCGGTCGGC
CCGATGGAGC TGCACATCCC CGCGATCGAG GGGATCGGCG GCTCCAACCT CTATTTGGTC
GACCGCTATG GCGCGCAGGA GATCTACGAC GTCGATTTCC GCCCGGTGGC GGGCATGGCG
CGCGACCAGC GGTCGGTCGG CCTGCACACG CTCGACCACC TGACCCACAA CGTCATGCGC
GGCCGCATGA ATCACTGGGC CGGCTTCTAC GAGAAGGTCT TCAACTTCCG CGAGATCCGC
TATTTCGACA TCGAGGGCCA GGCGACCGCG CTGCTCAGCC GCGCGATGAC CGCGCCCGAC
GACAAGATCC GCATCCCGCT CAACGAGAGC CAGGACGAGA ACAGCCAGAT CGAGGAATTC
CTGCGCGAAT ATAAGGGCGA GGGCATCCAG CACCTGGCGC TGTCGACCGA CAACATCTTC
GAGACGGTCG ACCGGCTCCG CGCCAACGGC ATCCGTTTCC AGTCGACCCC CGCCACCTAT
TATGAGGGGA TCGACGCCCG CCTGCCCGGC CATGGCCACG ACATCGCCGA GATGCAGAAG
CGCGGCATCC TGATCGACGG CGCACCCGAG ACCGGCGGCG GCATCCTGCT GCAGATCTTC
ACCGAGAACA TGGTCGGCCC GATCTTCTTC GAGATCATCC AGCGCAAGGG CAATGACGGC
TTCGGCGAAG GCAATTTCAA GGCGCTGTTC GAGTCGATCG AGCGCGACCA GATCCGCCGC
GGCGTGGTGA AGGTCGATGG CTGA
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| Protein sequence | MILSQEAAMT DTAIEPHHNP LGLDGFEFVE FTGPDPLALA ALFEAMGFTH LGDHRSKNVR
RYQQGDVNFI LNMDKGGQAA DFRAAHGPSA NAMAFRVHDA AKALEKAVAR GATPVEGPVG
PMELHIPAIE GIGGSNLYLV DRYGAQEIYD VDFRPVAGMA RDQRSVGLHT LDHLTHNVMR
GRMNHWAGFY EKVFNFREIR YFDIEGQATA LLSRAMTAPD DKIRIPLNES QDENSQIEEF
LREYKGEGIQ HLALSTDNIF ETVDRLRANG IRFQSTPATY YEGIDARLPG HGHDIAEMQK
RGILIDGAPE TGGGILLQIF TENMVGPIFF EIIQRKGNDG FGEGNFKALF ESIERDQIRR
GVVKVDG
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