| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4090 |
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| Symbol | |
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| ID | 8449713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4516118 |
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| End bp | 4518055 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645043137 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003203369 |
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| Protein GI | 258654213 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00816269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAACCG CCACATCCCG TCCGCCGCTG CGTACCGCGA TCGCCACCGT TTGCATCTCC
GGCACGCTGG AGGACAAGCT CGCCGCCGCC GCGGCGGCCG GCTTCGACGG CGTGGAGATC
TTCGAACCGG ACTTCGTGGT GTCCTCGTCG TCGGCGCGCG AGGTGCGGCA GCGGTGCGCC
GACCTGGGCC TGTCGATCGA TCTGTACCAA CCGTTCCGGG ACTTCGATTC CACCGACCCG
GCGCAGGTGG AGCTCAACCT GCGCCGCGCG GACCGCAAGT TCGACGTGAT GGAAGCCCTG
GGCACCGACC TGATCCTGGT CTGCTCGGCG GTCTCCCCGA CCGCCGTCGA CGACAACGCG
GTGATCGCCG AGCAACTGCA CCGGCTGGCC GAACGGGCTC GGCAGCGGGG CATGCGCATC
TCCTACGAGG CGCTGGCCTG GGGCACCAAG GTCAACACCT ACGACCGGTC CTGGGACATC
GTCCGGGCCG CCGATCACCC GGCGCTGGGC GTCTGCCTGG ACAGCTTCCA CATCCTGTCC
CGCGGGTCGG ACCCGGCCGG CATCGAGCAG ATCCCGGGCG AGAAGATCTT CTTCCTGCAG
CTGGCCGACG CGCCGTTCAT GAACATGGAC GTGTTGCAGT GGAGCCGGCA CCACCGGCTC
TTCCCCGAGC AGGGCACGTT CGACCTGCCC GCCTTCCTGG GCCATGTGTT GACCGCCGGT
TACACCGGTC CGCTCTCGCT CGAGGTGTTC AACGACGTGT TCCGCCAGTC CGACCCGGGC
CGGGCGGCGG TGGACGCGCA CCGCTCGCTG CTGGCCCTGT ACGAGTCGAC CGTGGGCAGC
GTGCCGCTGG ACCGGGCCGG CTCGGTCACC GGCGATTCCG GCGCGGTCGG GACCTCGGGG
TCGGACCGGC AGGTGCCGCC GGCCCCGGAA CTGGGCGGCT TCGCCTTCGC CGAGTTGGCC
GTCGACGACG AGAGCGGCCC GGCGGTCGCC GCCACCCTGT CCTGCCTGGG CTTCGTGCAC
TCCGGGCAGC ACCGCAGCAA GCCGGTGCAG CTGTGGTCGC AGGGTGATGC GCGGGTGCTG
CTCAACGCCG CCCGCGGGCT CGACGAACAC CCGACCGGGG CCGCGGTAGC GGCCATCGGC
TTCGAGACCC GGGACCCGGC GGCCGCGGCC GTGCGCGCCC AGGCCATGCT CGCCCCGCTG
CTGCCCCGCC GGGTCGGCGC CGGCGAGGCC GACCTGTCCG CGGTGGCCGC CCCCGACGAG
ACCGCGGTGT TCTTCTGCCG GACCGGGGCC GCGGACGCGA GCAGCTGGAT CGGCGATTTC
GAACCGACCG CCGCCGCGGC CGGGACCTCC CCATTGGGGC TGCGCCGCAT CGATCACGTG
GCCCTCACCC AGCCCTACGA CCGGTTCGAC GAGGCCAGCC TGTTCTTCCG CTGCGTGCTG
GGCCTGCCGA CCCGGCACAG CTCGGAGATC GCCGCGCCGT TCGGCCTGGT CCGCAACCGG
ACCGCGGCCA ACGTCGACGG CTCGGTCCGG ATCGGGATGA CCGTCTCGGT GCTGCGCCGC
GGCGGCCAAT GGGCGCCCGG GGTGACCGAC CCGCAACATG TGGCGTTCGC CACCGACGAC
ATCGTCGCGG CCGCTCGAGC GGCCGTCGCG GCCGGCGCCC CGGTACTGCC CGTGCCGGCC
AACTACTACG ACGACCTGGA CGCCCGGCTG GCCCTGCCGG CCGAGCAACT GGCCGCGCTG
CGCGAGCTGA ACCTGTTGTA CGACCGCACA TCTGACGGCG AGTTCTGGCA CTTCTACACC
GCCGTCCTGG GCGGGCGGGT GTTCTTCGAG GTGGTCCAGC GGATCGGCGA CTACCAGGGC
TACGGCGAGG TCAACTCGCC GGTACGGATG GCCGCGCACC GTCGGCAACG ACGCGCCACC
ACGTCCATCT CGTCCTGA
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| Protein sequence | MATATSRPPL RTAIATVCIS GTLEDKLAAA AAAGFDGVEI FEPDFVVSSS SAREVRQRCA
DLGLSIDLYQ PFRDFDSTDP AQVELNLRRA DRKFDVMEAL GTDLILVCSA VSPTAVDDNA
VIAEQLHRLA ERARQRGMRI SYEALAWGTK VNTYDRSWDI VRAADHPALG VCLDSFHILS
RGSDPAGIEQ IPGEKIFFLQ LADAPFMNMD VLQWSRHHRL FPEQGTFDLP AFLGHVLTAG
YTGPLSLEVF NDVFRQSDPG RAAVDAHRSL LALYESTVGS VPLDRAGSVT GDSGAVGTSG
SDRQVPPAPE LGGFAFAELA VDDESGPAVA ATLSCLGFVH SGQHRSKPVQ LWSQGDARVL
LNAARGLDEH PTGAAVAAIG FETRDPAAAA VRAQAMLAPL LPRRVGAGEA DLSAVAAPDE
TAVFFCRTGA ADASSWIGDF EPTAAAAGTS PLGLRRIDHV ALTQPYDRFD EASLFFRCVL
GLPTRHSSEI AAPFGLVRNR TAANVDGSVR IGMTVSVLRR GGQWAPGVTD PQHVAFATDD
IVAAARAAVA AGAPVLPVPA NYYDDLDARL ALPAEQLAAL RELNLLYDRT SDGEFWHFYT
AVLGGRVFFE VVQRIGDYQG YGEVNSPVRM AAHRRQRRAT TSISS
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