| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4666 |
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| Symbol | |
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| ID | 4313558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1649545 |
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| End bp | 1651437 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152510 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_776550 |
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| Protein GI | 115359412 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.735725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCT CGATCGCCAC CGTGTCACTG TCCGGCACCC TCGCCGAGAA GCTCGCCGCC
GTCCAGGCCG CCGGCTTCGA CGGTGTCGAA ATTTTCGAGA ACGACCTCGT CTACTTCGAC
GGATCGCCCG CCGACGTGCG GCGCATGGCC GCCGATCTCG GCCTCGACAT CGTGCTGTTC
CAGCCGTTTC GCGACTTCGA GGGCGTGAGC CCGGCCCAGC TCGCCCGCAA TCTCGACCGC
ATCCGGCGCA AGTTCGACGT GATGCACGCG CTCGGCACCG ACCGCATCCT GGTGTGCAGC
AACGTGTCGC CCGACACGAT CGCGGACGAC GCGCTGCTGG TCGACCAGCT CGGCGCGCTC
GCCGAAGCCG CGCGGGAGGC TGGCGTGGTC GCCGCGTACG AGGCGCTCGC GTGGGGCCGC
GTCGTGAATC GGTACGGCCA TGCGTGGCAG CTGGTGAACG CGGTGAACAG CCCGCACCTC
GGCCTCGCGC TCGACAGCTT CCATACGCTG TCGCTCGACG ATTCGCCGGA CGCGATCGCC
GACATTCCCG GCGACCGGAT CGCGTTCGTG CAGATCGCCG ATGCGCCGAA GCTCGCGATG
GACGTGCTCG AATGGAGCCG CCACTTCCGC TCGTTCCCCG GCCAGGGCGA CTTCGACCTC
GCCCGCTTCA CGGCTCGCGT GATCGAGTCC GGCTATACGG GGCCGCTGTC GCTCGAGATC
TTCAACGACG GCTTCCGCGC CGCACCGACC GCGATCACGG CCGCCGACGG CCACCGCTCG
CTGCTCTATC TGGAAGAACT GACGCGCGCG CGGCTCGCAC AGGACGGCCG CGCGCCGGCC
GCCGACCAGC CGCTGTTCGC GCCGCCGGCG CCGCCCGCGC ACGTCGGGTT CCAGTTCATC
GAATTCGCGG TCGACGCGCA GGCGGCGGCC ACTGTCGGCG CATGGCTCGG CAAGATGCGG
TTCCGGCTCG CGGGCCGCCA TCGGTCGAAG GACGTGACGC TGTTCCAGCA CGGCGCCGCA
TCGATCGTGC TGAACGCCGA GCGCGACTCG TTCGCCGATG CGTTCTTCCA GCAGCATGGG
TTGTCGCTCT GTGCGTCGGC GTTTCGCGTC GACGATGCGA AGGTAGCGTT CGAACGCGCG
GCCGGCTTCG GCTACGCGCC GTTTTCCGGG CGCGTCGGCC CGAATGAGCG CGTGCTGCCG
AGCGTGCAGG CGCCGGACGG CAGCCTCGAA TACTTCGTCG ACGAGACGCC GAACGCGCCG
ACGCTGTATG AATCGGATTT CGTGCTGACC GACATCGATG GCCCCACCGA AGTCGGGCCG
CTGACGGGCA TCGATCACGT GTGCCTCGCG CTGCCGGCGG ACGCGCTCGA TACGTGGATC
CTGTTCTTCA AGACTGCATT CGGCTTCGAA GCCGAGCGCA GCTGGCTCGT CCCCGACCCG
TACGGCCTGA TGCGCAGCCG GGCGGTGCGC AGCGCGGACG GCTCGGTGCG GATCGCGCTG
AATGCGTCGG TCGACCGCCA TACGGCCGTC GCCGAATCGC TGGACCGCTA TCACGGCACG
GGGCTGAACC ACGTCGCGTT CCGGACCGAC GACATCGTGA AGACGGTCGC CGCGTTTGCA
GCCGACGGCG TGCCGTTCCT GCGGATCCCG CCGAACTACT ACGACGATCT CGCCGCGCGC
TACGCGCTGC CGGATGAGCT GATCGACACG CTGAGCGCCC ACCATCTGCT GTACGACCGC
GACGAAAACG GCGGCGAATT CCTGCATGCG TATACGGAAC TGGTCGACAA CCGCTTCTCG
CTCGAGATCG TCGAGCGGCG CGGCGGCTAC GACGGCTACG GTGCGGCAAA CGCGGCCGTG
CGGCTCGCCG CGCAGGCCCA GCGCAGGAAA TAA
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| Protein sequence | MQRSIATVSL SGTLAEKLAA VQAAGFDGVE IFENDLVYFD GSPADVRRMA ADLGLDIVLF
QPFRDFEGVS PAQLARNLDR IRRKFDVMHA LGTDRILVCS NVSPDTIADD ALLVDQLGAL
AEAAREAGVV AAYEALAWGR VVNRYGHAWQ LVNAVNSPHL GLALDSFHTL SLDDSPDAIA
DIPGDRIAFV QIADAPKLAM DVLEWSRHFR SFPGQGDFDL ARFTARVIES GYTGPLSLEI
FNDGFRAAPT AITAADGHRS LLYLEELTRA RLAQDGRAPA ADQPLFAPPA PPAHVGFQFI
EFAVDAQAAA TVGAWLGKMR FRLAGRHRSK DVTLFQHGAA SIVLNAERDS FADAFFQQHG
LSLCASAFRV DDAKVAFERA AGFGYAPFSG RVGPNERVLP SVQAPDGSLE YFVDETPNAP
TLYESDFVLT DIDGPTEVGP LTGIDHVCLA LPADALDTWI LFFKTAFGFE AERSWLVPDP
YGLMRSRAVR SADGSVRIAL NASVDRHTAV AESLDRYHGT GLNHVAFRTD DIVKTVAAFA
ADGVPFLRIP PNYYDDLAAR YALPDELIDT LSAHHLLYDR DENGGEFLHA YTELVDNRFS
LEIVERRGGY DGYGAANAAV RLAAQAQRRK
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