More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_4567 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_3362  4-hydroxyphenylpyruvate dioxygenase  58.6 
 
 
635 aa  722    Pseudomonas putida GB-1  Bacteria  normal  0.283519  normal  0.789434 
 
 
-
 
NC_002947  PP_2554  4-hydroxyphenylpyruvate dioxygenase  58.44 
 
 
635 aa  719    Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.00914053 
 
 
-
 
NC_009656  PSPA7_0327  hypothetical protein  58.19 
 
 
634 aa  704    Pseudomonas aeruginosa PA7  Bacteria  normal  0.627098  n/a   
 
 
-
 
NC_009512  Pput_3161  4-hydroxyphenylpyruvate dioxygenase  58.44 
 
 
635 aa  719    Pseudomonas putida F1  Bacteria  normal  0.706766  normal 
 
 
-
 
NC_004578  PSPTO_2346  4-hydroxyphenylpyruvate dioxygenase, putative  57.78 
 
 
635 aa  734    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2130  4-hydroxyphenylpyruvate dioxygenase  57.59 
 
 
635 aa  733    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0402618  normal  0.678263 
 
 
-
 
NC_007492  Pfl01_4905  4-hydroxyphenylpyruvate dioxygenase  57.28 
 
 
633 aa  715    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3418  4-hydroxyphenylpyruvate dioxygenase  76.51 
 
 
630 aa  957    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0242311  normal  0.14685 
 
 
-
 
NC_007511  Bcep18194_B0343  4-hydroxyphenylpyruvate dioxygenase  76.3 
 
 
630 aa  977    Burkholderia sp. 383  Bacteria  normal  normal  0.880013 
 
 
-
 
NC_010676  Bphyt_4567  Xylose isomerase domain protein TIM barrel  100 
 
 
627 aa  1281    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2225  4-hydroxyphenylpyruvate dioxygenase  58.12 
 
 
635 aa  728    Pseudomonas putida W619  Bacteria  normal  0.44574  normal 
 
 
-
 
NC_007952  Bxe_B0882  4-hydroxyphenylpyruvate dioxygenase  94.58 
 
 
627 aa  1146    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.923988 
 
 
-
 
NC_010622  Bphy_1081  4-hydroxyphenylpyruvate dioxygenase  67.68 
 
 
628 aa  855    Burkholderia phymatum STM815  Bacteria  normal  0.796659  normal  0.416218 
 
 
-
 
NC_012560  Avin_38100  4-hydroxyphenylpyruvate dioxygenase  58.44 
 
 
632 aa  723    Azotobacter vinelandii DJ  Bacteria  normal  0.749235  n/a   
 
 
-
 
NC_008061  Bcen_3062  4-hydroxyphenylpyruvate dioxygenase  75.87 
 
 
630 aa  957    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0577  4-hydroxyphenylpyruvate dioxygenase  70.12 
 
 
687 aa  906    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5194  4-hydroxyphenylpyruvate dioxygenase  76.83 
 
 
630 aa  985    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4963  4-hydroxyphenylpyruvate dioxygenase  75.71 
 
 
630 aa  954    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0115166 
 
 
-
 
NC_008391  Bamb_4666  4-hydroxyphenylpyruvate dioxygenase  76.98 
 
 
630 aa  966    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.735725 
 
 
-
 
NC_008463  PA14_03000  hypothetical protein  58.1 
 
 
634 aa  698    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00135939 
 
 
-
 
NC_008543  Bcen2424_5305  4-hydroxyphenylpyruvate dioxygenase  75.87 
 
 
630 aa  957    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.114512 
 
 
-
 
NC_007948  Bpro_4496  4-hydroxyphenylpyruvate dioxygenase  50.95 
 
 
638 aa  613  9.999999999999999e-175  Polaromonas sp. JS666  Bacteria  normal  normal  0.460677 
 
 
-
 
NC_010524  Lcho_0418  xylose isomerase domain-containing protein  50.79 
 
 
635 aa  597  1e-169  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_1560  4-hydroxyphenylpyruvate dioxygenase  49.52 
 
 
632 aa  596  1e-169  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.288895  normal 
 
 
-
 
NC_007963  Csal_0292  4-hydroxyphenylpyruvate dioxygenase  49.44 
 
 
615 aa  582  1.0000000000000001e-165  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4415  4-hydroxyphenylpyruvate dioxygenase  50 
 
 
628 aa  583  1.0000000000000001e-165  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4305  4-hydroxyphenylpyruvate dioxygenase  50 
 
 
628 aa  583  1.0000000000000001e-165  Ralstonia pickettii 12J  Bacteria  normal  0.92924  normal 
 
 
-
 
NC_007348  Reut_B5035  4-hydroxyphenylpyruvate dioxygenase  49.28 
 
 
632 aa  578  1e-164  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3320  4-hydroxyphenylpyruvate dioxygenase  46.46 
 
 
630 aa  566  1e-160  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02058  hypothetical protein  49.59 
 
 
626 aa  555  1e-157  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0224521  normal  0.842888 
 
 
-
 
NC_013946  Mrub_0606  4-hydroxyphenylpyruvate dioxygenase  47.37 
 
 
624 aa  555  1e-157  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0633938 
 
 
-
 
NC_011894  Mnod_0122  Xylose isomerase domain protein TIM barrel  46.23 
 
 
627 aa  516  1.0000000000000001e-145  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.134725  n/a   
 
 
-
 
NC_006349  BMAA0848  putative 4-hydroxyphenylpyruvate dioxygenase  76.19 
 
 
684 aa  511  1e-143  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1894  putative amino acid dioxygenase  75.89 
 
 
684 aa  509  1e-143  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1752  putative 4-hydroxyphenylpyruvate dioxygenase  76.19 
 
 
684 aa  511  1e-143  Burkholderia mallei SAVP1  Bacteria  normal  0.10433  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0481  AP endonuclease  76.19 
 
 
684 aa  511  1e-143  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0891  AP endonuclease  76.19 
 
 
684 aa  511  1e-143  Burkholderia mallei NCTC 10247  Bacteria  normal  0.940921  n/a   
 
 
-
 
NC_008835  BMA10229_2205  putative 4-hydroxyphenylpyruvate dioxygenase  76.19 
 
 
684 aa  511  1e-143  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_7092  4-hydroxyphenylpyruvate dioxygenase  44.37 
 
 
631 aa  508  9.999999999999999e-143  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.26168  normal 
 
 
-
 
NC_009620  Smed_4204  xylose isomerase domain-containing protein  45.57 
 
 
629 aa  508  9.999999999999999e-143  Sinorhizobium medicae WSM419  Bacteria  normal  0.460434  normal 
 
 
-
 
NC_009485  BBta_6113  4-hydroxyphenylpyruvate dioxygenase  46.3 
 
 
623 aa  508  9.999999999999999e-143  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.471766 
 
 
-
 
NC_007650  BTH_II2059  4-hydroxyphenylpyruvate dioxygenase, putative  75.3 
 
 
687 aa  502  1e-141  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4755  4-hydroxyphenylpyruvate dioxygenase  46.03 
 
 
637 aa  499  1e-140  Methylobacterium sp. 4-46  Bacteria  normal  0.304127  normal 
 
 
-
 
NC_009654  Mmwyl1_3913  xylose isomerase domain-containing protein  42.86 
 
 
617 aa  496  1e-139  Marinomonas sp. MWYL1  Bacteria  normal  0.974395  normal 
 
 
-
 
NC_011366  Rleg2_5952  4-hydroxyphenylpyruvate dioxygenase  44.27 
 
 
631 aa  495  1e-139  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0955687  decreased coverage  0.00791612 
 
 
-
 
NC_009668  Oant_4428  4-hydroxyphenylpyruvate dioxygenase  44.37 
 
 
633 aa  493  9.999999999999999e-139  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0782  4-hydroxyphenylpyruvate dioxygenase  44.12 
 
 
630 aa  489  1e-137  Chelativorans sp. BNC1  Bacteria  normal  0.817905  n/a   
 
 
-
 
NC_011988  Avi_5449  4-hydroxyphenylpyruvate dioxygenase  42.51 
 
 
615 aa  472  1e-132  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3855  Xylose isomerase domain protein TIM barrel  43.97 
 
 
624 aa  466  9.999999999999999e-131  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_4079  xylose isomerase domain-containing protein  44.27 
 
 
629 aa  464  1e-129  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1586  4-hydroxyphenylpyruvate dioxygenase  42.01 
 
 
621 aa  462  9.999999999999999e-129  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.435654  n/a   
 
 
-
 
NC_013947  Snas_5095  Xylose isomerase domain-containing protein TIM barrel  42.65 
 
 
604 aa  439  9.999999999999999e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0443788 
 
 
-
 
NC_013235  Namu_4090  Xylose isomerase domain protein TIM barrel  44.15 
 
 
645 aa  435  1e-120  Nakamurella multipartita DSM 44233  Bacteria  normal  hitchhiker  0.00816269 
 
 
-
 
NC_008010  Dgeo_2375  xylose isomerase-like TIM barrel  47.53 
 
 
477 aa  416  9.999999999999999e-116  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1477  Xylose isomerase domain protein TIM barrel  42.77 
 
 
596 aa  397  1e-109  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0230944  normal  0.313669 
 
 
-
 
NC_007484  Noc_1437  4-hydroxyphenylpyruvate dioxygenase  36.09 
 
 
351 aa  191  2.9999999999999997e-47  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_34750  4-hydroxyphenylpyruvate dioxygenase  33.85 
 
 
359 aa  162  1e-38  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0960  4-hydroxyphenylpyruvate dioxygenase  31.05 
 
 
369 aa  161  4e-38  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0301  4-hydroxyphenylpyruvate dioxygenase  32.84 
 
 
365 aa  160  5e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.000140026 
 
 
-
 
NC_008060  Bcen_2785  4-hydroxyphenylpyruvate dioxygenase  32.84 
 
 
365 aa  160  5e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0321  4-hydroxyphenylpyruvate dioxygenase  32.84 
 
 
365 aa  160  5e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0223  4-hydroxyphenylpyruvate dioxygenase  32.84 
 
 
365 aa  160  6e-38  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.376735  hitchhiker  0.0000014808 
 
 
-
 
NC_013456  VEA_003655  4-hydroxyphenylpyruvate dioxygenase  32.01 
 
 
357 aa  160  6e-38  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02177  4-hydroxyphenylpyruvate dioxygenase  31.4 
 
 
357 aa  159  1e-37  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007651  BTH_I3106  4-hydroxyphenylpyruvate dioxygenase  33.23 
 
 
365 aa  158  2e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0248  4-hydroxyphenylpyruvate dioxygenase  32.54 
 
 
365 aa  159  2e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.000564922 
 
 
-
 
NC_008390  Bamb_0240  4-hydroxyphenylpyruvate dioxygenase  32.54 
 
 
365 aa  158  3e-37  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3420  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  157  4e-37  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3330  4-hydroxyphenylpyruvate dioxygenase  32.85 
 
 
358 aa  157  7e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.000135901 
 
 
-
 
NC_004578  PSPTO_3553  4-hydroxyphenylpyruvate dioxygenase  33.04 
 
 
363 aa  155  2e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.225452  n/a   
 
 
-
 
NC_008786  Veis_2137  4-hydroxyphenylpyruvate dioxygenase  32.04 
 
 
377 aa  154  2.9999999999999998e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.658248 
 
 
-
 
NC_010623  Bphy_3887  4-hydroxyphenylpyruvate dioxygenase  31.9 
 
 
375 aa  155  2.9999999999999998e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2773  4-hydroxyphenylpyruvate dioxygenase  33.51 
 
 
377 aa  154  4e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.0648229  normal 
 
 
-
 
NC_012857  Rpic12D_4410  4-hydroxyphenylpyruvate dioxygenase  33.24 
 
 
357 aa  154  5e-36  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4300  4-hydroxyphenylpyruvate dioxygenase  33.24 
 
 
357 aa  154  5e-36  Ralstonia pickettii 12J  Bacteria  normal  0.449166  normal 
 
 
-
 
NC_007948  Bpro_4213  4-hydroxyphenylpyruvate dioxygenase  30.7 
 
 
376 aa  154  5.9999999999999996e-36  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_53070  4-hydroxyphenylpyruvate dioxygenase  31.71 
 
 
357 aa  154  7e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2582  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2232  4-hydroxyphenylpyruvate dioxygenase (legiolysin)  32.21 
 
 
348 aa  152  1e-35  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2204  4-hydroxyphenylpyruvate dioxygenase (legiolysin)  32.21 
 
 
348 aa  152  1e-35  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009074  BURPS668_3784  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia pseudomallei 668  Bacteria  normal  0.205691  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0003  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia mallei SAVP1  Bacteria  normal  0.809  n/a   
 
 
-
 
NC_008836  BMA10229_A1975  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia mallei NCTC 10229  Bacteria  normal  0.673327  n/a   
 
 
-
 
NC_007434  BURPS1710b_0016  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3120  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia mallei SAVP1  Bacteria  normal  0.379899  n/a   
 
 
-
 
NC_009076  BURPS1106A_3845  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3528  4-hydroxyphenylpyruvate dioxygenase  32.24 
 
 
365 aa  152  1e-35  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4766  4-hydroxyphenylpyruvate dioxygenase  29.5 
 
 
375 aa  152  2e-35  Variovorax paradoxus S110  Bacteria  normal  0.578295  n/a   
 
 
-
 
NC_008752  Aave_4191  4-hydroxyphenylpyruvate dioxygenase  30.68 
 
 
378 aa  152  3e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2866  4-hydroxyphenylpyruvate dioxygenase  31.34 
 
 
365 aa  150  5e-35  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000187167 
 
 
-
 
NC_007951  Bxe_A0286  4-hydroxyphenylpyruvate dioxygenase  31.94 
 
 
365 aa  150  5e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.408126 
 
 
-
 
NC_008228  Patl_2997  4-hydroxyphenylpyruvate dioxygenase  31.4 
 
 
360 aa  150  5e-35  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.171273  n/a   
 
 
-
 
NC_008825  Mpe_A0346  4-hydroxyphenylpyruvate dioxygenase  31.64 
 
 
370 aa  150  5e-35  Methylibium petroleiphilum PM1  Bacteria  normal  0.152583  normal 
 
 
-
 
NC_007492  Pfl01_2917  4-hydroxyphenylpyruvate dioxygenase  30.81 
 
 
358 aa  150  6e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.433802  normal  0.723827 
 
 
-
 
NC_009439  Pmen_1696  4-hydroxyphenylpyruvate dioxygenase  31.71 
 
 
360 aa  150  8e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.141185 
 
 
-
 
NC_010681  Bphyt_3671  4-hydroxyphenylpyruvate dioxygenase  31.04 
 
 
365 aa  149  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0292973  hitchhiker  0.0000000943483 
 
 
-
 
NC_010682  Rpic_3388  4-hydroxyphenylpyruvate dioxygenase  29.57 
 
 
368 aa  147  7.0000000000000006e-34  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1040  4-hydroxyphenylpyruvate dioxygenase  29.36 
 
 
372 aa  147  8.000000000000001e-34  Psychrobacter sp. PRwf-1  Bacteria  normal  0.53626  normal 
 
 
-
 
NC_008061  Bcen_3972  4-hydroxyphenylpyruvate dioxygenase  32.7 
 
 
375 aa  146  9e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4395  4-hydroxyphenylpyruvate dioxygenase  32.7 
 
 
375 aa  146  9e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  0.83775  normal  0.881765 
 
 
-
 
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