Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3041 |
Symbol | |
ID | 8020724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3209849 |
End bp | 3210955 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644831838 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_002982982 |
Protein GI | 241664622 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCA CGCCTTGGGA AAACCCGATG GGCACCGCCG GCTTCGAGTT CATCGAATAC GCCGCGCCGG ACCCCGTTGC CATGGGCAAG CTGTTCGAGA ACATGGGCTT TACCGCCATC GCGAAACACC GTCACAAGAA CGTGACGCTG TACCGCCAGG GCGAGATCAA CTTCATCATC AACGCCGAGC CCGATTCGTT CGCGCAGCGC TTTGCGCGCC TGCACGGCCC GTCGATCTGC GCGATCGCGT TTCGCGTGCG AGACGCCGCG TTCGCCTACA AGCGTGCGCT GGAGCTGGGC GCCTGGGGCT TCGACACCCA CAGCGGCCCG ATGGAGCTGA ACATTCCGGC CATCAAGGGC ATCGGCGATT CGCTGATCTA CCTGGTCGAC CGCTGGACCG GCAAGAACGA CGCCAAGGCC GGCGACATCG GCAACATCAG CATCTACGAC GTCGATTTCG TGCCCATCGC GGGCGCCAAC CCGAACCCCA CCGGGCACGG CCTGACCTAC ATCGACCACC TGACGCACAA CGTCTACCGT GGCCGGATGA AGGAATGGGC CGAGTTTTAC GAACGCTTCT TCAACTTCCG TGAGGTCCGC TACTTCGACA TCGAAGGCCA GGTCACGGGC GTGAAGAGCA AGGCGATGAC GAGCCCGTGC GGCAATATCC GCATCCCCAT CAACGAGGAA GGGACGGAGA AGGCCGGTCA GATCCAGGAG TATCTGGACA TGTACCACGG CGAGGGCATC CAGCACATCG CGCTCGGTTC GACCAACCTG TTCAACACGG TGGACGCGCT GCGCAGCAAG GGCATCAAGC TGCTGGACAC GATCGACACG TATTACGAAC TGGTCGACAA GCGCATCCCC GGCCATGGCG AAGACGTGGC GGAACTGAAG AAGCGCAAGA TCCTGATCGA CGGCGCACCG GGCGACCTTC TGCTGCAGAT CTTCTCGGAA AACCAGCTCG GTCCGATCTT CTTCGAGTTC ATCCAGCGCA AGGGCAACCA AGGTTTTGGC GAGGGCAACT TCAAGGCGCT CTTCGAGTCG ATCGAACTCG ACCAGATGCG CCGCGGCGTG CTCAAGGCCG ACGACCAGCC GGCCTGA
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Protein sequence | MQFTPWENPM GTAGFEFIEY AAPDPVAMGK LFENMGFTAI AKHRHKNVTL YRQGEINFII NAEPDSFAQR FARLHGPSIC AIAFRVRDAA FAYKRALELG AWGFDTHSGP MELNIPAIKG IGDSLIYLVD RWTGKNDAKA GDIGNISIYD VDFVPIAGAN PNPTGHGLTY IDHLTHNVYR GRMKEWAEFY ERFFNFREVR YFDIEGQVTG VKSKAMTSPC GNIRIPINEE GTEKAGQIQE YLDMYHGEGI QHIALGSTNL FNTVDALRSK GIKLLDTIDT YYELVDKRIP GHGEDVAELK KRKILIDGAP GDLLLQIFSE NQLGPIFFEF IQRKGNQGFG EGNFKALFES IELDQMRRGV LKADDQPA
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