| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3362 |
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| Symbol | |
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| ID | 5871147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3795422 |
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| End bp | 3797329 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548478 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001669590 |
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| Protein GI | 167034359 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.283519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.789434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTT CGATCGCTAC CGTGTCCTTG AGCGGCACCC TGCCGGAAAA GCTCGAAGCC
ATCGCCGCCG CCGGTTTTGA CGGCGTCGAG ATCTTCGAAA ACGACTTGCT CTATTACGCT
GGCAGCCCGC GCCAGGTGCG TCAGATGTGT GCCGACCTGG GCATTGCCAT CACCTTGTTC
CAGCCGTTTC GTGATTTTGA AGGTTGCCGC CGCGACCGCC TGCAGAAAAA CCTCGACCGC
GCCGAGCGCA AGTTCGACCT GATGCAGGAG CTGGGTACCG ACTTGGTGCT GGTGTGCAGC
AACGTCCAGG CCGATGCCCT GGGTGATGAG CAACTGCTGG TCGACGACTT GCGTCTGTTG
GCCGAGCATG CCGGCAAGCG CGGCCTGCGC ATTGGTTACG AAGCCCTGGC GTGGGGCCGC
CACGTCAACA CCTATCAGCA AGTCTGGAAC CTAGTGCGCC AGGCTGACCA CCCGGCCCTC
GGGGTGATCC TTGACAGCTT CCACACCTTG TCGCTGAAGG GCGACCCAAG CGCGATCCGC
GACATCCCAG GCGACAAGAT CTTCTTCGTG CAAATGGCCG ACGCGCCGAT CCTGGCCATG
GATGTGCTGG AGTGGAGCCG CCATTTCCGC TGCTTCCCAG GGCAGGGCGA AATGGATATG
GCCGGCTTCC TCGCGCCGAT CCTTGCCACG GGGTACCGTG GGCCGCTGTC GCTGGAAATT
TTCAACGACG GCTTCCGCGC CGCGCCGACC CGGCAGAATG CCGCCGACGG TTTGCGTTCG
CTGCTGTACC TCGAAGAACA GACCCGCTTG CGCTTGGAGC AGGAACACAC GCCGATCGAA
CCTGGCGTGC TGTTCACCCC GCCGGCGGCC AGCGCCTATG ATGGGGTGGA GTTCCTCGAG
TTCGCGGTCG ACGAAGCCGT CGGCGCGCGC CTGAGCAACT GGCTAAAGCG CCTGGGCTTT
GCCGAAGCCG GCAAGCACCG CAGCAAGGAC GTTCAACTGT TGCGCCAGGG CGATATCAAC
ATTGTCCTGA ACGCCGAACC GTATTCCTTC GGCCACAACT TCTTCGAGGC CCACGGCCCG
TCGCTGTGCG CCACCGCGTT GCGGGTCAAG GATCCGCAAG CCGCCTTGAA ACGCGCCACC
GCCTTCCGTG GCCAGCCGTT CCGTGGCCTG GTCGGCCCCA ACGAGTGCGA AGTACCCGCG
GTACGTGCAC CGGACGGCAG CCTGCTGTAC CTGGTGGAGC AGGGCACTGC TGGCCACACC
TTGTACGACA CCGATTTCAG CCTGGACAAG AGCGCCACTG CCACTGGCGG CCTGCGCCGC
ATCGACCATA TGGCGCTGGC CCTGCCGGCC GAGTCGCTGG ACAGCTGGGT GCTGTTCTAC
AAGAGCCTGT TCGACTTTGC CGCCGACGAT GAAGTGGTGC TGCCCGACCC GTATGGCCTG
GTCAAGAGCC GCGCCCTGCG CAGCCAGTGC GGCACCCTGC GCCTGCCGCT GAACATCTCG
GAAAACCGCA ACACGGCTAT TGCCCATGCG CTGTCCAGCT ACCGGGGGTC GGGTGTACAC
CACATCGCCT TCGATTGTGA TGACATCTTC CGTGAGGTGG CACGGGCCAA GCTGGCCGGG
GTTCCGCTGC TGGAAATCCC GCTCAACTAC TACGACGACC TCGCGGCGCG CTTCGATTTC
GACGACGAGT TCCTCAGCGA GCTGGCGTAC TACAACGTGC TGTATGACCG CGACGCCCAG
GGCGGCGAGC TGTTCCACGT GTACACCGAA CCGTTCGAAG AGCGCTTCTT CTTCGAAATC
ATCCAGCGCA AGGGGGGCTA TGCCGGTTAC GGCGCGGCCA ACGTCGCGGT GCGCCTGGCG
GCCATGGCCA AGGCCCGTAG CGGCGCGGCG CGCAAGCCGG TCCTCTGA
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| Protein sequence | MQRSIATVSL SGTLPEKLEA IAAAGFDGVE IFENDLLYYA GSPRQVRQMC ADLGIAITLF
QPFRDFEGCR RDRLQKNLDR AERKFDLMQE LGTDLVLVCS NVQADALGDE QLLVDDLRLL
AEHAGKRGLR IGYEALAWGR HVNTYQQVWN LVRQADHPAL GVILDSFHTL SLKGDPSAIR
DIPGDKIFFV QMADAPILAM DVLEWSRHFR CFPGQGEMDM AGFLAPILAT GYRGPLSLEI
FNDGFRAAPT RQNAADGLRS LLYLEEQTRL RLEQEHTPIE PGVLFTPPAA SAYDGVEFLE
FAVDEAVGAR LSNWLKRLGF AEAGKHRSKD VQLLRQGDIN IVLNAEPYSF GHNFFEAHGP
SLCATALRVK DPQAALKRAT AFRGQPFRGL VGPNECEVPA VRAPDGSLLY LVEQGTAGHT
LYDTDFSLDK SATATGGLRR IDHMALALPA ESLDSWVLFY KSLFDFAADD EVVLPDPYGL
VKSRALRSQC GTLRLPLNIS ENRNTAIAHA LSSYRGSGVH HIAFDCDDIF REVARAKLAG
VPLLEIPLNY YDDLAARFDF DDEFLSELAY YNVLYDRDAQ GGELFHVYTE PFEERFFFEI
IQRKGGYAGY GAANVAVRLA AMAKARSGAA RKPVL
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