| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5952 |
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| Symbol | |
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| ID | 6977338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | + |
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| Start bp | 365679 |
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| End bp | 367574 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643393404 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_002278222 |
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| Protein GI | 209546332 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0955687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00791612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGACCT CGATTGCGAC TGTGACGATC AGCGGCGAAC TGCCTGAGAA GCTCGAGGCG
ATCGCCCGGG CGGGGTTCGA TGGCGTCGAG ATCTTCGAAA ACGATTTCCT GGCTTTCGAC
GGCAGCCCGG CCGATGTCGG AAAACTGGTG CGCGACCATG GCCTTGAGAT CACGCTGTTT
CAGCCGTTTC GGGATTTCGA GGGCATGCCG GAGCCGCTGC GCAGCCGCAC CTTCGATCGG
GCGGAACGGA AGTTCGACGT GATGCAGCAG CTTGGAACAG ATCTGGTGCT GGTCTGCTCG
AACATCTCGC CGGCCGCCAT CGGCGGCATC GACAGGGCGG CTGAGGATTT CCGCGAACTT
GGCGAGCGCG CCGCCCGGCG CGGACTGAGG GTGGGTTACG AGGCGCTCGC CTGGGGTCGC
CATATCAGTG ATCACCGCGA CGCCTGGGAA ATCGTTCGGC GCGCCGATCA TCCGAATGTC
GGCCTCATCC TCGACAGCTT CCACACTCTG TCGCGCAAGA TCGACGTTAA TTCGATCCGC
TCGATCCCCA AGGAGAAGAT CTTCATCGTC CAGCTTGCCG ATGCGCCGCT GATCGACATG
GACCTGCTCT ACTGGAGCCG CCACTTCCGC AACATGCCTG GAGAAGGCGA GCTTCCCGTC
ACGGCGTTTA CCGAAGCCGT CGCTGCCACA GGTTATGACG GCTACTTCTC GCTGGAGATT
TTCAACGACC AGTTTCGAGG CGGCCTGTCG CGGCCGATCG CCGCCGACGG CCATCGCTCG
CTGATCTATC TCGGCGATCA GGTGCGCCGC CATCTCGGCA CCGGCAGCAT GACCGGGGCG
GCGATGCCGG AACGGGCGGC CGTCCAGGGC GTCGGCTTCG TGGAGTTTGC CACGGACGAA
CAGGATGAAG TCGAGCTGGT GGCCTTGCTC CGCACCCTCG GCTTCAGACA GACCGCCGTC
CACCGCACCA AGAAAGTCTC TCTGTTCGAG CAGGGCGAGA TCCGGATCCT CGTCAATGTC
GATCAGGCGG GATTTGCCAA TGCGGCCTAC GCCGTGCATG GGACGTTTGC CTATGCCATG
GCACTGGTCG TCGACGACGC CGCAAAGGCA TATGCGCGTG CGCTTGCTCT CGATGCCGAG
CCCTTCGCCC AGCCGGTCGC GGAGGGTGAA CTCGAGCTGC CCGCCATTCG TGGCGTCGGC
GGCGGCATCG TCTATCTGAT CGACGACAAG AGCGCCCTCG GCCGCTTTTC CGAAATCGAT
TTTCGCCCGG TCACCGACGA CACCGACACG GCGTCTGCCG GCCTTATTCG CGTCGATCAC
GTCGCCCAGA CGGTCGGCTA TGATGAAATG CTCACCTGGC TTTTGTTCTA CACGTCGATC
TTCGAGACCC ATAAGACCCC GATGGTCGAC ATCATCGATC CAGCCGGCGT GGTGCGCAGC
CAGGTCGTCG AGAACCAGTC GGGCGCGCTG CGCATCACCA TGAACGGAGC CGAAAACCGC
CGCACCCTGG CCGGCCATTT CATTGCCGAA AAGTTCGGAT CCGGCATCCA GCACCTGGCG
TTTTCGACCG ACGATATCTT TGCAACCGCC GAAAAACTTC GCAGCTGCGG ATTCCGGTCC
CTGCACATTT CGCCGAACTA TTACGACGAC GTCGAAGCCC GCTTCGGGCT CGATCCCGTC
ATGACCGAGC GGCTGAAAGC GGAGAACATC CTCTATGACC GGGACGAGCA CGGCGAGTAT
TTCCAGCTCT ACAGCGGCAC CTATGGCGAG GGTTTCTTTT TCGAGATCGT CGAGCGCCGC
GGCTATCGCG GCTATGGCGC CCCGAACGCA ATTTTCCGGA TCGCCGCGCT GAAAAGACAA
ATGCGCCCGG AAGGAATTCC GAAAGACGTC GATTAA
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| Protein sequence | MKTSIATVTI SGELPEKLEA IARAGFDGVE IFENDFLAFD GSPADVGKLV RDHGLEITLF
QPFRDFEGMP EPLRSRTFDR AERKFDVMQQ LGTDLVLVCS NISPAAIGGI DRAAEDFREL
GERAARRGLR VGYEALAWGR HISDHRDAWE IVRRADHPNV GLILDSFHTL SRKIDVNSIR
SIPKEKIFIV QLADAPLIDM DLLYWSRHFR NMPGEGELPV TAFTEAVAAT GYDGYFSLEI
FNDQFRGGLS RPIAADGHRS LIYLGDQVRR HLGTGSMTGA AMPERAAVQG VGFVEFATDE
QDEVELVALL RTLGFRQTAV HRTKKVSLFE QGEIRILVNV DQAGFANAAY AVHGTFAYAM
ALVVDDAAKA YARALALDAE PFAQPVAEGE LELPAIRGVG GGIVYLIDDK SALGRFSEID
FRPVTDDTDT ASAGLIRVDH VAQTVGYDEM LTWLLFYTSI FETHKTPMVD IIDPAGVVRS
QVVENQSGAL RITMNGAENR RTLAGHFIAE KFGSGIQHLA FSTDDIFATA EKLRSCGFRS
LHISPNYYDD VEARFGLDPV MTERLKAENI LYDRDEHGEY FQLYSGTYGE GFFFEIVERR
GYRGYGAPNA IFRIAALKRQ MRPEGIPKDV D
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