Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2130 |
Symbol | |
ID | 3367644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2489489 |
End bp | 2491396 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652479 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_235211 |
Protein GI | 66045370 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0402618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.678263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGTT CAATTGCTAC CGTATCCTTG AGCGGTACTC TGCCCGAAAA GCTCGAAGCC ATCGCCGCAG CCGGCTTTGA CGGCGTCGAG ATTTTCGAAA ACGACTTGTT GTATTACGAC GGCAGCCCAC GCAACATCAG GCAAATGTGT GCCGACCTGG GCATCGCCAT CACCCTGTTC CAGCCGTTCC GCGATTTCGA AGGCTGCCGC CGTGATCGTC TGCAGCGCAA TATCGACCGT GCCGAACGCA AATTCGATCT GATGCAGGAG CTGGGCACCG ATCTGGTGCT GGTCTGCAGC AATGCGTCTG CCGATTCGGT GGGCGACGAA AACATTCTGC TCGATGACCT GGGCCTGCTC GCCGAGCGCG CGGGTGCCCG TCACCTGCGC GTCGGTTATG AAGCGCTGGC CTGGGGCAAG CACGTGAACA CCTGGCAACA GGTCTGGAAC CTGGTGCGCC AGGTCGACCA CCCGGCACTA GGCGTGTTGC TCGACAGTTT TCATACCCTG TCGCTGAAGG GCGATCCGAG CGCCATCGCG CAGATCCCGG GCGACAAGAT CTTCTTCGTG CAGATGGCCG ACGCGCCGCT TCTGGCGATG GATGTGCTGG AGTGGAGCCG CCATTTCCGC TGCTTCCCGG GTCAGGGTGA ATTCGATCTG GCCGGCTTCC TCGCGCCGAT CCTGCGCAGT GGCTATACCG GGCCGTTGTC GCTGGAAGTG TTCAACGATG GCTTCCGTGC AGCGCCGACA CGCGCCAATG CCGCGGACGG TCTGCGTTCG CTGCTTTATC TTGAAGAGAA AACCCGCCAG CTGATGGCGC GTGACGAGCC GGCCGCGGTT CCCGAAATCC TCTTCAATCC GCCTGCGGCC AGTACCTACA ATGGCGTCGA GTTCCTCGAG TTTGCCGTTG ACGAGAGCCA CGGCGCTCGC CTGTCGGGCT GGCTGCAACG GCTGGGCTTT GCCAAGCTGG GTCAGCATCG CTCCAAGGCG GTCAGTCTGC TGGGGCAGGG CGATATCAGG ATTGTGCTCA ATGCCGAACC CTATTCCTTC GCCCACAGTT TTTTCGAGGC GCACGGCCCT TCGTTGTGCG CCACCGCCTT GCGCGTCGAC GACGGTCATC AGTCGCTGGA ACGCGCGCGT GCTTTCAAGG GCCAGCCCTA TCGTGGCCTG GTCGGTCCCA ATGAACGGGA GATTCCGTCG GTCCGCGCGC CCGACGGCAG CCTGATCTAT CTGGTGGATA ACGCCGCACC GGGAGAATCG ATTTACGACA GCGATTTTGT CGTCGATCCG CAAGCCGTCG CCAAGGGCGG GTTGCAGCGT ATCGACCACA TGGCCATGGC GCTGCCGGCC GACAGTCTGG ACAGCTGGGT TTTGTTCTAC AAAAGCATTC TGGATTTCGA GGCTGACGAC GAAGTGGTCT TGCCCGACCC CTACGGCCTG GTCAAGAGCC GGGCGCTGCG CAGCCGTTGC AGCACCGTGC GCTTGCCGTT GAATATTTCC GAAAATCGCA ACACGGCCAT TTCCCATGCG CTGTCGAGCT ATCGCGGCTC GGGTGTGCAC CACATCGCAT TTTCCTGCGA AGACATCTTT GCCGAGGTAA GCCGCGCCAA GGAAGCGGGC GTACCGTTGC TGGACATCCC GCTCAACTAC TACGATGACC TGGCGGCGCG CTTCGATTTC GACGAGGAGT TTCTCAGCGA ACTGGCGTAT TACAACGTGC TCTATGACCG CGATGCGCAG GGTGGCGAGT TGTTCCACGT CTACACCGAT GCGTTCGACG GGCGCTTCTT CTTCGAAATC CTGCAGCGCA AGAACGGTTA CGCAGGGTAT GGCGCTGCCA ACGTCCCGGT GCGTCTGGCT GCGATGGCCA AGGCGCGCAA TGTGGCAGCA CGTCAGGCGC GTCTGTAA
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Protein sequence | MQRSIATVSL SGTLPEKLEA IAAAGFDGVE IFENDLLYYD GSPRNIRQMC ADLGIAITLF QPFRDFEGCR RDRLQRNIDR AERKFDLMQE LGTDLVLVCS NASADSVGDE NILLDDLGLL AERAGARHLR VGYEALAWGK HVNTWQQVWN LVRQVDHPAL GVLLDSFHTL SLKGDPSAIA QIPGDKIFFV QMADAPLLAM DVLEWSRHFR CFPGQGEFDL AGFLAPILRS GYTGPLSLEV FNDGFRAAPT RANAADGLRS LLYLEEKTRQ LMARDEPAAV PEILFNPPAA STYNGVEFLE FAVDESHGAR LSGWLQRLGF AKLGQHRSKA VSLLGQGDIR IVLNAEPYSF AHSFFEAHGP SLCATALRVD DGHQSLERAR AFKGQPYRGL VGPNEREIPS VRAPDGSLIY LVDNAAPGES IYDSDFVVDP QAVAKGGLQR IDHMAMALPA DSLDSWVLFY KSILDFEADD EVVLPDPYGL VKSRALRSRC STVRLPLNIS ENRNTAISHA LSSYRGSGVH HIAFSCEDIF AEVSRAKEAG VPLLDIPLNY YDDLAARFDF DEEFLSELAY YNVLYDRDAQ GGELFHVYTD AFDGRFFFEI LQRKNGYAGY GAANVPVRLA AMAKARNVAA RQARL
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