| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0122 |
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| Symbol | |
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| ID | 7304357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 129870 |
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| End bp | 131753 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643597899 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002495472 |
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| Protein GI | 220920171 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.134725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTTG CCATCGCGAC CGTCTGCCTG AGCGGCACGC TCGGCGAGAA GCTGGAGGCG
ATCGCCGCCG CCGGCTTCAC GCAGGTCGAG ATCTTCGAGA ACGACCTTCT GTCCTTCAGC
GGCACGCCTC GCGACGTGCG CCGCATGGCC GAAGACCTCG GCCTCTCGGT CGCCGTCTAC
CAGCCGTTCC GCGATTTCGA GGGCATGCCC GAGCCGCAGC GGGCCAAGGT CTTCGCCCGC
GCCGAGCGCA AGTTCGACAC CATGCAGGAG CTCGGCTGCG ACCTTTTGAT GGTCTGCTCC
AACGTCTCGC CCGACAGCCT CGGCGGCATC GACCGGGCGG CCGCGGATTT CCGGGAGCTC
GGCGAGCGGG CGCAGGCGCG CGGCTTCCGC GTGGGCTACG AGGCCTTGGC CTGGGGGCGG
CACGTCAATG ATTACCGCGA TGCCTGGGAG ATCGTGCGCC GGGCCGACCA TCCGGCGGTC
GGCTTCGTGC TCGACAGCTT CCACGTGCTC GCCCGCGGCA CCGATCTGAG TGCCATCCGG
TCGATCCCGA AGGAGAAGAT CGTCCTGGTG CAGATGGCCG ACGCGCCGAA GCTCGCCATG
GATTACCTGT CCTGGAGCCG CCACTACCGC TGCTTCCCCG GCCAGGGAGA GCTGCCGATC
ACCGCCTTCG CGGACGCGCT GGGGGCGACG GGCTTCGACG GCCTGATGTC GCTCGAGATC
TTCAGCGACC GGTTCCGGGC CGGCTCGGCG CGCAGCGTCG CGGTCGACGG CCGCCGGTCC
CTCCTCGTCA TGCTCGACGA CCTGCGCCGC CGCTCATCCG TGCCGAATCT CCCGGTGCTG
CCGCCGCGCG CGGCTTGCGA GGGCGTCGAG TTCATCGAGT TCGCGATGGA CGATGAGGCC
GCCGCCTCCT TCGAGCGCAT GCTCGGCGGG CTCGGCTTCG CCCGGACCGC CCGCCACCGC
TCGAAATCCG TGACGCGCTG GAGCCAGGGC GGCATCAACC TCGTGGTCAA CACTGAGAAG
GAGGGATTCG CTCATTCCTT CCAGGTCACG CATGGCGCCT CGGTCTGCGC CGTCGCCCTG
AAGGTCGACG ATGCGCAGGC GGCGGTGGAG CGGGCCGTCG CGCTCCTCGA CGAGCCGTTC
CGGCAGGCGG TCGCACCGGG CGAGCTCGAC ATCCCGGCGG TGCGTGGGGT CGGGGGCAGC
CTCCTCTACT TCGTCGACCG CCGCAGCGGC CTCGACCGGC TGTGGAACGT CGATTTCGAG
CCGGTCGCAA CGGAACCGAC CGGGGATGCG GGCCTCATCG CGGTCGATCA CCTCTCGCAG
AGCATGCGCC ACGAGGAGAT GCTGACCTGG CTCCTGTTCT ACACCGGGCT GTTCGACCTC
GCGCAGCAGC CGGTGCAGGA CGTGGTGGAT CCCGGCGGCG TGGTGCAGAG CCAGGCCGTC
GAGGCGCCCG GCGGGGCGTT GCGCCTCGTC CTCAACGCCT CGCAGAGCCG CCAGACGCTG
TCGTCGCGCT TCCTCTCGGA AGCCTTCGGC GGAGGCGTGC AGCATGTGGC GCTCGCCACC
GACGACATCT TCGCGACCGT CGAGGCGCTG CGGGCGAACG GTGTCGACCT CCTGCCGATC
CCGGAGAACT ACTACGACGA TCTCGAAGTC CGGACCGACC TGAGCGCGGA GACGATCGCG
CGGCTGCGCG CCGGCAACAT CCTCTACGAC CGCGACGGAC AGGCCGAGTT CTTCCAGGTC
TATACGCGCA GCGTGCTCGA GGGCGGGTTC TTCTTCGAGA TCGTCGAACG GCGTGACTAT
CGCGGCTACG GGGCCATCAA CGCGCCGATC CGTCTTGCGG CGCAGACCCA TCTCGCGCCA
CATCCGGCGC TCCCCACCCG TTAG
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| Protein sequence | MRLAIATVCL SGTLGEKLEA IAAAGFTQVE IFENDLLSFS GTPRDVRRMA EDLGLSVAVY
QPFRDFEGMP EPQRAKVFAR AERKFDTMQE LGCDLLMVCS NVSPDSLGGI DRAAADFREL
GERAQARGFR VGYEALAWGR HVNDYRDAWE IVRRADHPAV GFVLDSFHVL ARGTDLSAIR
SIPKEKIVLV QMADAPKLAM DYLSWSRHYR CFPGQGELPI TAFADALGAT GFDGLMSLEI
FSDRFRAGSA RSVAVDGRRS LLVMLDDLRR RSSVPNLPVL PPRAACEGVE FIEFAMDDEA
AASFERMLGG LGFARTARHR SKSVTRWSQG GINLVVNTEK EGFAHSFQVT HGASVCAVAL
KVDDAQAAVE RAVALLDEPF RQAVAPGELD IPAVRGVGGS LLYFVDRRSG LDRLWNVDFE
PVATEPTGDA GLIAVDHLSQ SMRHEEMLTW LLFYTGLFDL AQQPVQDVVD PGGVVQSQAV
EAPGGALRLV LNASQSRQTL SSRFLSEAFG GGVQHVALAT DDIFATVEAL RANGVDLLPI
PENYYDDLEV RTDLSAETIA RLRAGNILYD RDGQAEFFQV YTRSVLEGGF FFEIVERRDY
RGYGAINAPI RLAAQTHLAP HPALPTR
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