| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2375 |
|---|
| Symbol | |
|---|
| ID | 4073603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 114208 |
|---|
| End bp | 115641 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641228577 |
|---|
| Product | xylose isomerase-like TIM barrel |
|---|
| Protein accession | YP_593884 |
|---|
| Protein GI | 94971844 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGCG CCGCGCCGTT TCGCAAGGCT ATCGCCACGG TATCGCTGAG CGGTACCCTG
CCCGAAAAAC TCCGTGCCGC TGCCGCAACG GGCTTTGACG CGATCGAAAT TTTCGAGCCT
GACCTGCTGA ATGTTCAGGC CACCCCCGCC GAGGTGCGGG CGATGTGCGA GGATCTCGGT
CTGGAGATCG CGCTCTTTCA GCCGTTCCGC GATTTTGAAG CCATGCCCGA GCCGTACCGC
CGGCGCAACC TGGAGCGGGC CGAGCGCAAG TTCGATGTGA TGCAGGCACT CGGTGCGCCG
CAGGTTCTGG TATGCAGCAA CGTGCATGAA CTGGCGCAGG CCGACCCTGC GCGGGCCGCC
GCTGACTTGC GCGAACTCGC CGAGCGAGCA CACCAGCGCG GCCTCAAGGT GGGCTATGAG
GCGTTGGCCT GGGGCCGACA CGTGCAGCGC TGGCGCCAGG CCTGGGACAT CGTGCAGCAA
GCCGATCATC CGGCGCTGGG ATTGATTCTG GATAGTTTTC ATACGTTGGC GCTGGGCGAC
TCCCTGGCCG GCCTGGCCGA GACCGTACCG AGCGAGAAGA TCTTTTTCGT GCAGCTGGCC
GACAGCCCGC GCAAATCCAT GGATGTGCTC TCCTGGAGCC GCCATTACCG CAATTTCCCG
GGGCAGGGCG AGCTGGATGT GGTGGGCTTT ACCCGTGAGC TGGTGCGGGC AGACTACCAG
GGCCCCCTCT CGCTGGAGAT TTTCAACGAT GAGTTCCGTG CTGCCTCGGC CTATCTGACC
GCCCACGACG GTCTGCGCTC CCTGCTGTGG GTGGAGGCCG AGGCGGGTGC CACCGCCTTA
CCCGCGCCGC CCGTCTTCAG TGGATACGAG TTTTTGGAAT TCGCGGTGGA GGGGCAGGCC
ACCCGTGAAC TTTCGGAGCA GCTCCAGGCT CTAGGATTCA GCTGGACGGG ACAACACCGC
AGCAAACAGG TCAGTCTCTG GCAGCAGGGC GATATCAACC TGATTCTGAA CAGTGAACCC
GACAGCCAGG CTGCCGATTT TTACGACTTG TACGGCCCCT CGGTCTGTGC GATTGCCCTG
CGGGTCGACA ACGTGGCCCG CGCCATCGAA CGCGCCGATA GGCTGCTGTG TAGCGTATGG
CAGGAGGTCC GCGGCGAGGA CGAATATCCT CTGGTGGCCC TGCGTGCCCC CAACGGCATG
CTGTTCTATC TGGTGAGCAG CGAAGACGCG GGCAAACTCT ACCTGCAGGA CTTTGATCTG
CGCGGCCAAG TCGGGACCGG TGCGGGTCTT CAGACCATCG ATCATGTGGC GCAGGCCTTG
CCACCGGACC GTCTGGGCAG CTTCGTGCTG TTTTACCGCA CGGTCTTTGG ACTCGAACCC
GAAGGTCTGC ATGAAATTCC CGACCCCTAC GGACTGGTGA GTAGCCGCGG GTAG
|
|---|
| Protein sequence | MTRAAPFRKA IATVSLSGTL PEKLRAAAAT GFDAIEIFEP DLLNVQATPA EVRAMCEDLG
LEIALFQPFR DFEAMPEPYR RRNLERAERK FDVMQALGAP QVLVCSNVHE LAQADPARAA
ADLRELAERA HQRGLKVGYE ALAWGRHVQR WRQAWDIVQQ ADHPALGLIL DSFHTLALGD
SLAGLAETVP SEKIFFVQLA DSPRKSMDVL SWSRHYRNFP GQGELDVVGF TRELVRADYQ
GPLSLEIFND EFRAASAYLT AHDGLRSLLW VEAEAGATAL PAPPVFSGYE FLEFAVEGQA
TRELSEQLQA LGFSWTGQHR SKQVSLWQQG DINLILNSEP DSQAADFYDL YGPSVCAIAL
RVDNVARAIE RADRLLCSVW QEVRGEDEYP LVALRAPNGM LFYLVSSEDA GKLYLQDFDL
RGQVGTGAGL QTIDHVAQAL PPDRLGSFVL FYRTVFGLEP EGLHEIPDPY GLVSSRG
|
|---|
| |