More than 300 homologs were found in PanDaTox collection
for query gene Bfae_29720 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  100 
 
 
312 aa  625  1e-178  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  69.84 
 
 
314 aa  456  1e-127  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  68.57 
 
 
314 aa  451  1e-125  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  64.13 
 
 
314 aa  410  1e-113  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  66.77 
 
 
309 aa  405  1.0000000000000001e-112  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  64.13 
 
 
315 aa  398  9.999999999999999e-111  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  67.45 
 
 
324 aa  393  1e-108  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  63.12 
 
 
317 aa  392  1e-108  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  65.44 
 
 
323 aa  389  1e-107  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  60.47 
 
 
305 aa  379  1e-104  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  55.59 
 
 
324 aa  360  2e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  61.94 
 
 
316 aa  354  1e-96  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  61.69 
 
 
318 aa  350  2e-95  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  56.94 
 
 
319 aa  347  2e-94  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  56.6 
 
 
319 aa  343  1e-93  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  52.48 
 
 
318 aa  342  2.9999999999999997e-93  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  58.13 
 
 
314 aa  338  9e-92  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  60.8 
 
 
320 aa  338  9e-92  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  55.84 
 
 
319 aa  337  1.9999999999999998e-91  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  57.39 
 
 
313 aa  330  3e-89  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  54.64 
 
 
319 aa  319  3e-86  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  54.67 
 
 
318 aa  320  3e-86  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  52.29 
 
 
319 aa  319  3e-86  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  49.03 
 
 
321 aa  316  3e-85  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  53.77 
 
 
317 aa  304  2.0000000000000002e-81  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  52.63 
 
 
317 aa  301  1e-80  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  48.85 
 
 
308 aa  296  2e-79  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  54.06 
 
 
318 aa  296  3e-79  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  49.5 
 
 
322 aa  293  2e-78  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  47.75 
 
 
293 aa  292  5e-78  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  45.33 
 
 
305 aa  285  5e-76  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  46.23 
 
 
293 aa  282  4.0000000000000003e-75  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  47.35 
 
 
296 aa  282  6.000000000000001e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  47.35 
 
 
296 aa  280  2e-74  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  47 
 
 
296 aa  280  2e-74  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  47 
 
 
296 aa  279  4e-74  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  47 
 
 
302 aa  276  2e-73  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  46.64 
 
 
296 aa  275  1.0000000000000001e-72  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  46.64 
 
 
296 aa  275  1.0000000000000001e-72  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  47.06 
 
 
296 aa  273  2.0000000000000002e-72  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  46.29 
 
 
296 aa  272  6e-72  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  46.1 
 
 
331 aa  270  2.9999999999999997e-71  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  47.37 
 
 
292 aa  264  2e-69  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  44.01 
 
 
305 aa  259  4e-68  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  44.68 
 
 
298 aa  258  7e-68  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  45.7 
 
 
309 aa  255  8e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
313 aa  229  3e-59  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
316 aa  228  1e-58  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
316 aa  226  3e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
315 aa  226  5.0000000000000005e-58  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  39.67 
 
 
314 aa  225  9e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  44.33 
 
 
306 aa  223  4e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  41.45 
 
 
316 aa  218  1e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  43.07 
 
 
305 aa  216  4e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
317 aa  215  5.9999999999999996e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
302 aa  214  1.9999999999999998e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  39.58 
 
 
305 aa  214  1.9999999999999998e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  42.55 
 
 
317 aa  208  7e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
283 aa  208  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
335 aa  206  5e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  36.3 
 
 
321 aa  204  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
335 aa  202  7e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  43.19 
 
 
299 aa  201  9e-51  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
319 aa  198  1.0000000000000001e-49  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
285 aa  197  2.0000000000000003e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  39.26 
 
 
309 aa  196  5.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
307 aa  192  4e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  37 
 
 
320 aa  192  6e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
321 aa  190  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
313 aa  189  4e-47  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
308 aa  187  2e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  35.67 
 
 
315 aa  186  3e-46  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
292 aa  186  4e-46  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1687  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
333 aa  182  5.0000000000000004e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.94 
 
 
296 aa  180  2e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  38.11 
 
 
314 aa  180  2.9999999999999997e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  38.11 
 
 
314 aa  180  2.9999999999999997e-44  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
307 aa  180  2.9999999999999997e-44  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
295 aa  179  4e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
295 aa  178  8e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  37.11 
 
 
321 aa  178  1e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
308 aa  177  2e-43  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
299 aa  176  6e-43  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
318 aa  174  1.9999999999999998e-42  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
309 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  37.5 
 
 
334 aa  172  5e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
317 aa  172  6.999999999999999e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
308 aa  172  6.999999999999999e-42  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  39.21 
 
 
306 aa  171  1e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  39.44 
 
 
287 aa  170  3e-41  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.05 
 
 
299 aa  170  3e-41  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
300 aa  170  4e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
317 aa  168  9e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
296 aa  168  1e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  38.04 
 
 
328 aa  168  1e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
320 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
300 aa  167  2e-40  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
292 aa  166  4e-40  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013595  Sros_5821  sugar ABC transporter, permease protein  34.59 
 
 
315 aa  166  5.9999999999999996e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.286987  normal  0.812253 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
310 aa  165  8e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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