| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3555 |
|---|
| Symbol | |
|---|
| ID | 7860819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3948651 |
|---|
| End bp | 3949592 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643867658 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002883559 |
|---|
| Protein GI | 229822033 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.582328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.269585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCC TCGGCAACCC GGCTCAGGCT CTCGACCGTC GGTCGAGAGC CGGAGCCCGG
GCCCCCCGAC GCCGTGGCGG CGCGGTCGCC TACGTGTTCC TCATCCCGTG GCTCATCGGC
GTCATCGGGA TCACGCTCGG GCCGATGCTG GCCTCGCTGT ACCTGTCGTT CACCGACTAC
CGGCTCGGCT CGACGCCGTC CTGGGTCGGC GCGGCGAACT ACGTGCGCCT GTTCACGCAG
GACGACCGGT TCATCGCCTC AGCCGGCGTC ACGGCCAGGT ACGTCCTGGT GTCGGTGCCG
CTCCAGCTCG TGTTCGCGCT CGCGATCGCC GTGCTCCTCG ACCGGGGCGT GCGGGGGCTC
GCCATCTACC GATCGATCTA CTACCTGCCG TCGCTGCTCG GATCGAGCGT CGCCGTCGCC
GTGCTCTGGC GTCAGATCTT CTCCAGCCAG GGACTCGTGG TGCAGGTCGC CGACTGGTTC
GGGATCACGA TGGGTGGCTG GATCGCCGAT CCGGCGCACG CGCTGGACAC GCTCATCGTG
CTGAACGTGT GGACGTTCGG GTCGCCGATG GTCATCTTCC TGGCCGGCCT GCGCCAGATC
CCGAACGACC TCGTCGAGGC CGCCCGGGTC GACGGCGCGG GTGCCCTCCG GCGCTTCTGG
TCGGTGATCC TGCCGCTGCT GTCGCCCGTC GTGTTCTTCA ACCTCGTCCT GCAGCTGATC
GGCGCGTTCC AGGCGTTCAC GCCGGCGTAC ATCATCAGCT CCGGGACGGG CGGACCGGCC
GACTCGACCC TCTTCTACTC GTTGTACCTG TTCCAGTCGG GATTCCAGGC CTTCAACATG
GGCTACGCCA GTGCCATGGC CTGGATCCTC TTCATCGTGA TCGGCGCCTT CACCGCCGTG
AACTTCATCG CCTCGAAGTA CTGGGTGCAC TATGAGACGT GA
|
|---|
| Protein sequence | MVALGNPAQA LDRRSRAGAR APRRRGGAVA YVFLIPWLIG VIGITLGPML ASLYLSFTDY
RLGSTPSWVG AANYVRLFTQ DDRFIASAGV TARYVLVSVP LQLVFALAIA VLLDRGVRGL
AIYRSIYYLP SLLGSSVAVA VLWRQIFSSQ GLVVQVADWF GITMGGWIAD PAHALDTLIV
LNVWTFGSPM VIFLAGLRQI PNDLVEAARV DGAGALRRFW SVILPLLSPV VFFNLVLQLI
GAFQAFTPAY IISSGTGGPA DSTLFYSLYL FQSGFQAFNM GYASAMAWIL FIVIGAFTAV
NFIASKYWVH YET
|
|---|
| |