More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3621 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  100 
 
 
335 aa  666    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  97.01 
 
 
335 aa  625  1e-178  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  68.77 
 
 
317 aa  432  1e-120  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  48.38 
 
 
309 aa  292  6e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  44.51 
 
 
305 aa  274  2.0000000000000002e-72  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  44.07 
 
 
316 aa  268  1e-70  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  46.73 
 
 
306 aa  259  4e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  46.08 
 
 
321 aa  258  1e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  46.43 
 
 
313 aa  256  5e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
316 aa  251  2e-65  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  43.67 
 
 
317 aa  247  2e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  42.17 
 
 
315 aa  244  1.9999999999999999e-63  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  41.48 
 
 
314 aa  244  1.9999999999999999e-63  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  42.28 
 
 
316 aa  242  7e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  40.06 
 
 
321 aa  237  2e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  40.46 
 
 
314 aa  234  2.0000000000000002e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
305 aa  233  4.0000000000000004e-60  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
305 aa  232  6e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
314 aa  231  1e-59  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  41.5 
 
 
317 aa  231  2e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
324 aa  230  3e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
305 aa  229  4e-59  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
305 aa  229  4e-59  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  43.65 
 
 
300 aa  228  8e-59  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
314 aa  227  2e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  43.04 
 
 
307 aa  226  3e-58  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  41.69 
 
 
318 aa  224  1e-57  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  40.45 
 
 
315 aa  224  1e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  40.68 
 
 
314 aa  224  2e-57  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  43.65 
 
 
307 aa  224  2e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
296 aa  224  2e-57  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
296 aa  223  3e-57  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  38.63 
 
 
319 aa  223  4e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
298 aa  223  4.9999999999999996e-57  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  38.92 
 
 
319 aa  221  9.999999999999999e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
296 aa  221  9.999999999999999e-57  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  43.55 
 
 
309 aa  221  1.9999999999999999e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  42.03 
 
 
313 aa  221  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
292 aa  221  1.9999999999999999e-56  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
317 aa  220  3e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
302 aa  219  3e-56  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
318 aa  219  3.9999999999999997e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
317 aa  219  7.999999999999999e-56  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  40.4 
 
 
296 aa  218  8.999999999999998e-56  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
296 aa  218  8.999999999999998e-56  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
296 aa  218  1e-55  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
302 aa  218  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  37.84 
 
 
322 aa  216  2.9999999999999998e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
331 aa  217  2.9999999999999998e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
296 aa  216  2.9999999999999998e-55  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  40.07 
 
 
296 aa  216  5e-55  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
319 aa  216  5e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  34.76 
 
 
321 aa  216  5.9999999999999996e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  41.69 
 
 
319 aa  215  7e-55  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
293 aa  214  1.9999999999999998e-54  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  40.13 
 
 
320 aa  213  2.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  39.37 
 
 
319 aa  213  4.9999999999999996e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
293 aa  213  4.9999999999999996e-54  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
323 aa  212  5.999999999999999e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  40.53 
 
 
320 aa  212  7.999999999999999e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
319 aa  212  9e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  39.27 
 
 
324 aa  210  3e-53  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
292 aa  209  4e-53  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
318 aa  209  5e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  39.38 
 
 
283 aa  209  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1687  binding-protein-dependent transport systems inner membrane component  40.84 
 
 
333 aa  209  8e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  37.8 
 
 
309 aa  204  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  41.36 
 
 
316 aa  204  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  39.39 
 
 
318 aa  204  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  39.25 
 
 
312 aa  204  3e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
308 aa  203  4e-51  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  40.34 
 
 
285 aa  201  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
294 aa  200  3e-50  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5821  sugar ABC transporter, permease protein  36.63 
 
 
315 aa  190  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.286987  normal  0.812253 
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  41.44 
 
 
334 aa  189  7e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
317 aa  186  5e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
300 aa  184  2.0000000000000003e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  34.44 
 
 
321 aa  184  2.0000000000000003e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
313 aa  177  3e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3537  ABC transporter membrane spanning protein (galacturonic acid)  37.62 
 
 
322 aa  176  7e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601194  normal 
 
 
-
 
NC_013525  Tter_0184  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
330 aa  174  1.9999999999999998e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  31.91 
 
 
315 aa  174  2.9999999999999996e-42  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
292 aa  174  2.9999999999999996e-42  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
299 aa  172  5.999999999999999e-42  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
318 aa  172  9e-42  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
317 aa  171  2e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  30.46 
 
 
296 aa  171  2e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  35 
 
 
314 aa  168  1e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  35 
 
 
314 aa  168  1e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
313 aa  167  2e-40  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
299 aa  167  2e-40  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
308 aa  166  5e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
293 aa  165  1.0000000000000001e-39  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
291 aa  164  2.0000000000000002e-39  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
306 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
292 aa  162  6e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
307 aa  162  1e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
316 aa  162  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  33.75 
 
 
307 aa  162  1e-38  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  35.76 
 
 
293 aa  160  3e-38  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
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