More than 300 homologs were found in PanDaTox collection
for query gene Avi_5628 on replicon NC_011988
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011988  Avi_5628  Acyl-CoA dehydrogenase  100 
 
 
603 aa  1230    Agrobacterium vitis S4  Bacteria  normal  0.491683  n/a   
 
 
-
 
NC_011726  PCC8801_0028  acyl-CoA dehydrogenase domain protein  31.61 
 
 
603 aa  301  2e-80  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0026  acyl-CoA dehydrogenase domain protein  31.61 
 
 
603 aa  301  2e-80  Cyanothece sp. PCC 8802  Bacteria  normal  0.0227659  normal 
 
 
-
 
NC_007413  Ava_1648  Acyl-CoA dehydrogenase  31.38 
 
 
602 aa  278  2e-73  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.458371 
 
 
-
 
NC_006349  BMAA1017  acyl-CoA dehydrogenase domain-containing protein  39.25 
 
 
586 aa  269  1e-70  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0431122  n/a   
 
 
-
 
NC_008835  BMA10229_0294  acyl-CoA dehydrogenase domain-containing protein  39.25 
 
 
586 aa  269  1e-70  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0434167  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0276  acyl-CoA dehydrogenase domain-containing protein  39.25 
 
 
586 aa  269  1e-70  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1799  Acyl-CoA dehydrogenases  39.25 
 
 
586 aa  269  1e-70  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1301  acyl-CoA dehydrogenase domain-containing protein  39.25 
 
 
586 aa  269  1e-70  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1713  acyl-CoA dehydrogenase domain-containing protein  39.25 
 
 
586 aa  267  4e-70  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2151  hypothetical protein  28.15 
 
 
563 aa  234  3e-60  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp2177  hypothetical protein  28.15 
 
 
563 aa  227  4e-58  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009075  BURPS668_A1798  Acyl-CoA dehydrogenases  30.68 
 
 
597 aa  209  1e-52  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1712  acyl-CoA dehydrogenase domain-containing protein  30.5 
 
 
597 aa  206  8e-52  Burkholderia pseudomallei 1106a  Bacteria  normal  0.312835  n/a   
 
 
-
 
NC_006349  BMAA1018  acyl-CoA dehydrogenase domain-containing protein  30.5 
 
 
597 aa  206  1e-51  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0256489  n/a   
 
 
-
 
NC_009079  BMA10247_A1300  acyl-CoA dehydrogenase domain-containing protein  30.5 
 
 
597 aa  206  1e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0295  acyl-CoA dehydrogenase domain-containing protein  30.5 
 
 
597 aa  206  1e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0483895  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0275  acyl-CoA dehydrogenase domain-containing protein  32.01 
 
 
1189 aa  205  2e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_18370  acyl-CoA dehydrogenase  29.53 
 
 
583 aa  187  5e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_18380  acyl-CoA dehydrogenase  29.05 
 
 
549 aa  184  3e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.355555  normal 
 
 
-
 
NC_011988  Avi_5627  Acyl-CoA dehydrogenase  27.03 
 
 
548 aa  136  9.999999999999999e-31  Agrobacterium vitis S4  Bacteria  normal  0.124757  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  24.93 
 
 
381 aa  107  6e-22  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  25.14 
 
 
386 aa  102  3e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  27.84 
 
 
384 aa  100  9e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  24.65 
 
 
387 aa  99  2e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  25.63 
 
 
390 aa  99.4  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  25.63 
 
 
390 aa  99.4  2e-19  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  27.54 
 
 
384 aa  99.4  2e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  26.74 
 
 
379 aa  98.2  4e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  25.63 
 
 
375 aa  97.4  7e-19  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  26.18 
 
 
399 aa  97.1  9e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  24.72 
 
 
417 aa  96.7  1e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1248  acyl-CoA dehydrogenase domain-containing protein  28.68 
 
 
415 aa  96.3  1e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.702512  n/a   
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  24.23 
 
 
389 aa  96.7  1e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  25.35 
 
 
375 aa  95.5  3e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  24.58 
 
 
380 aa  95.5  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28760  acyl-CoA dehydrogenase  25.21 
 
 
382 aa  95.1  3e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.12851  normal  0.0971486 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  24.79 
 
 
375 aa  94.4  5e-18  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_012793  GWCH70_0441  acyl-CoA dehydrogenase domain protein  25.87 
 
 
401 aa  94.4  5e-18  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  23.61 
 
 
390 aa  94.7  5e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  28.53 
 
 
418 aa  94.4  5e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  26.63 
 
 
429 aa  93.6  8e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  26.76 
 
 
386 aa  93.6  9e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  25.56 
 
 
375 aa  93.6  1e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  31.77 
 
 
388 aa  93.6  1e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  27.2 
 
 
379 aa  93.2  1e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  24.79 
 
 
375 aa  93.6  1e-17  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  26.17 
 
 
379 aa  93.2  1e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  27.35 
 
 
388 aa  92.4  2e-17  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  26.26 
 
 
379 aa  92.8  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0741  acyl-CoA dehydrogenase domain protein  29.37 
 
 
417 aa  92.4  2e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.37799  normal  0.427722 
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  25.85 
 
 
375 aa  92  3e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_008554  Sfum_1371  butyryl-CoA dehydrogenase  23.16 
 
 
389 aa  92  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.183303  normal 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  25.07 
 
 
375 aa  91.7  3e-17  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  26.35 
 
 
385 aa  91.7  4e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_008146  Mmcs_1300  acyl-CoA dehydrogenase-like protein  23.73 
 
 
388 aa  91.3  4e-17  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1336  acyl-CoA dehydrogenase domain-containing protein  23.73 
 
 
388 aa  91.3  4e-17  Mycobacterium sp. JLS  Bacteria  normal  0.11867  normal 
 
 
-
 
NC_008705  Mkms_1317  acyl-CoA dehydrogenase domain-containing protein  23.73 
 
 
388 aa  91.3  4e-17  Mycobacterium sp. KMS  Bacteria  normal  normal  0.247959 
 
 
-
 
NC_013595  Sros_1345  acyl-CoA dehydrogenase, C-terminal domain protein  25 
 
 
387 aa  91.3  5e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  27.94 
 
 
379 aa  91.3  5e-17  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  26.42 
 
 
388 aa  90.9  6e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009073  Pcal_1308  acyl-CoA dehydrogenase domain-containing protein  27.42 
 
 
407 aa  90.5  7e-17  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0345991 
 
 
-
 
NC_007958  RPD_3106  acyl-CoA dehydrogenase-like  27.51 
 
 
375 aa  90.5  8e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0271451 
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  23.51 
 
 
389 aa  90.5  9e-17  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  26.87 
 
 
642 aa  90.1  1e-16  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  23.66 
 
 
385 aa  90.1  1e-16  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  25.34 
 
 
386 aa  89.7  1e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  26.15 
 
 
390 aa  89  2e-16  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_007777  Francci3_1549  butyryl-CoA dehydrogenase  24.4 
 
 
387 aa  89.4  2e-16  Frankia sp. CcI3  Bacteria  normal  0.431805  normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  26.65 
 
 
379 aa  89.4  2e-16  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_013037  Dfer_3002  acyl-CoA dehydrogenase domain protein  23.38 
 
 
388 aa  89.4  2e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  25.95 
 
 
385 aa  89  2e-16  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  26.18 
 
 
379 aa  88.6  3e-16  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  26.37 
 
 
379 aa  88.6  3e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  26.18 
 
 
379 aa  88.6  3e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  25.95 
 
 
385 aa  89  3e-16  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2188  acyl-CoA dehydrogenase domain-containing protein  25.07 
 
 
387 aa  88.6  3e-16  Frankia sp. EAN1pec  Bacteria  normal  normal  0.130468 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  27.18 
 
 
380 aa  88.6  3e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  27 
 
 
375 aa  88.6  3e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  25.37 
 
 
379 aa  88.6  3e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  26.37 
 
 
379 aa  88.6  3e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  26.37 
 
 
379 aa  88.2  4e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  26.37 
 
 
379 aa  88.2  4e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  23.76 
 
 
389 aa  88.2  4e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  26.37 
 
 
379 aa  87.8  5e-16  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  26.37 
 
 
379 aa  87.8  5e-16  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_008554  Sfum_3291  acyl-CoA dehydrogenase domain-containing protein  25.99 
 
 
555 aa  87.8  5e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.729038  normal 
 
 
-
 
NC_013162  Coch_0730  acyl-CoA dehydrogenase domain protein  23.27 
 
 
381 aa  87.8  6e-16  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
382 aa  87.4  6e-16  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  25.75 
 
 
388 aa  87.4  7e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  30.38 
 
 
384 aa  87  9e-16  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_013093  Amir_6366  acyl-CoA dehydrogenase domain protein  24.44 
 
 
387 aa  87  9e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  26.06 
 
 
389 aa  87  9e-16  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  29.3 
 
 
384 aa  86.3  0.000000000000001  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  25.71 
 
 
387 aa  86.7  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  25.63 
 
 
379 aa  85.9  0.000000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  25 
 
 
377 aa  86.3  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3165  acyl-CoA dehydrogenase domain-containing protein  32.23 
 
 
445 aa  86.3  0.000000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256023  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  24.17 
 
 
380 aa  85.5  0.000000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  26.33 
 
 
375 aa  86.3  0.000000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
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