| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5628 |
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| Symbol | |
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| ID | 7381104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 653387 |
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| End bp | 655198 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649198 |
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| Product | Acyl-CoA dehydrogenase |
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| Protein accession | YP_002547435 |
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| Protein GI | 222106644 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.491683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTTC CCGAGGTGAA GAAAAAAGGG TCTGCCGAGG TCCTGGCGAC ATTGCGGCAG
CTGGATCTGG CCATGGGCGA TCCGTGGGAT ACGGCAGCAC CGGCCTCCTT CGCGCAGATC
ATGGCCGATG ACGAAGCAGA GCGGTTCCCC GCCCGTCCCT ATGATGCGCT GGTCGGTGAA
AGCATCAGCC AATGGCTGGT ACCGGAAGGT GCCGGCGGCA TGATGTTTTC CTATCCGGAA
TCCCTGCAAA TGTACCGCGC CATTGCCCGC CGCGATATGA CGCTGGCAAC CATCGCCATC
CTGCCCTTCA TCGGCTATCT GGCGATTGTC ACCTGCGGCA CGGAAGAGCA GATCCGCGAA
TATGGACGCT TCGTTGCCTC TGGTGGCTCG ATTTCCTGGG GGTTGAGCGA AGGCCGCCAT
GGTAGCGATC TTCTGACCAA CGAGACCACG GCGATCAAGG ATGGTGAGTT CTACCGCGTC
AATGGCGAGA AATGGCCGAT TGGTTTTGCC GACCGGGCCG GTGCGATGAT CGTCCATGCC
CGCACCGACG AGGCGATTTC GCCGGTCTCT CACACCATGC TGATCGTTGA CCGCAGCCAT
CTTGAGCGCA AGAATTACCG GGTTCTGCCC AATGAACGTC TTTACGGCGT GCGCGGCCTG
CCGCTGGGCG GGGTGCGCTA CGAGGATGCC AAGGTGCCGG TTGGTCAGGT GCTTGGCCGC
GAAGGTGCCG GGTTGGAAGT GTCGTTGAAA AGCCAGCAAT CCCTGCGGCT TGGCGTGGCC
GCCATGTGCC TCGGCGCTGT CGATACCGGC TTGCGGCTGG CCTATGGCTT TGCTGCCAAC
CGAAGCCTCT ATGGCAACCA GAAGGTGATC GAACTGCCGG TCAGCCGTCG CCAGATTGCC
GATGCCTATG CTGATCTGAT GATCTCGGAA ATCATGGTCG CTTCTGCGAC CCGGTTGGTG
CATTGCCTGC CCCGTCAGCT TTTCCTTTAT TCCTCCATTT CCAAATATCT GGTGCCGAAG
CGGCTGGAGC AATCGCTGCA AAGCCTGGCA ACCGTGATTG GTGCTCGCTT CTACCTGCGT
GATGGCTTTG GCCATGGGGT CTTCCAGAAG CTGCTGCGCG ATATCGGCAT GACCGGCTTT
GTCGATGGCA ATAGCTATGT GAACATGCGC GTCGTTGGCA GCCAGATGGA ATTGGCGCTT
GGCAAGGCGC TGGCTGCTCG TGAACAGCCG TTTGATGCAG CGCGCCGGGC GTTGCTGGAT
GATATCTACG ATATCCGCCG TCCTGTTGGG CCGCCGCGCT GGAGCAAGCT CGGCCTGTCC
GGCAATGGCG ACGATATCAG TCTGGCTGGC CTTCCCGATG CGCTGCGCGA ATTGAAGCCG
CTGGTGTCGG AGAGCGAATA TGCGCTGGCA GTGAGCGTGA TGGATGAGGT CGTCAAACTG
GATCAGGCCC GACGCGACGC CCAGGCGAGA CTTGGTCGCG GTTTTTCCAA CAGCGCCAAT
TTCTATGCAT TGACGGACCG CTATTGCAGC CTGAATGCCG CCGCCTGCTG CATCCAGTTT
GCTGTGGCCA ATGCTGGTGG CATGCCTGCT TCCCTGCCGG ACGGATCGGG TTGGCTTGGC
TATTGCCTGA AGCGGATCAT GCACTGGATG TATCCGACTG AGTTCCTGCC GGAGCCGGAA
GAGGTGTCGG GCCTGATTGA GGTGATCGGC GATCTCTATC AGTCCAACCG GGCCTTCTCG
GTCTTCCCCT TCGAATATGC GGGAAGCCGT GAAAGCATGG AACAGGGCGG CAAGCTGCTG
ACCAATAGTT GA
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| Protein sequence | MLFPEVKKKG SAEVLATLRQ LDLAMGDPWD TAAPASFAQI MADDEAERFP ARPYDALVGE
SISQWLVPEG AGGMMFSYPE SLQMYRAIAR RDMTLATIAI LPFIGYLAIV TCGTEEQIRE
YGRFVASGGS ISWGLSEGRH GSDLLTNETT AIKDGEFYRV NGEKWPIGFA DRAGAMIVHA
RTDEAISPVS HTMLIVDRSH LERKNYRVLP NERLYGVRGL PLGGVRYEDA KVPVGQVLGR
EGAGLEVSLK SQQSLRLGVA AMCLGAVDTG LRLAYGFAAN RSLYGNQKVI ELPVSRRQIA
DAYADLMISE IMVASATRLV HCLPRQLFLY SSISKYLVPK RLEQSLQSLA TVIGARFYLR
DGFGHGVFQK LLRDIGMTGF VDGNSYVNMR VVGSQMELAL GKALAAREQP FDAARRALLD
DIYDIRRPVG PPRWSKLGLS GNGDDISLAG LPDALRELKP LVSESEYALA VSVMDEVVKL
DQARRDAQAR LGRGFSNSAN FYALTDRYCS LNAAACCIQF AVANAGGMPA SLPDGSGWLG
YCLKRIMHWM YPTEFLPEPE EVSGLIEVIG DLYQSNRAFS VFPFEYAGSR ESMEQGGKLL
TNS
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