| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5627 |
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| Symbol | |
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| ID | 7381103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 651663 |
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| End bp | 653309 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649197 |
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| Product | Acyl-CoA dehydrogenase |
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| Protein accession | YP_002547434 |
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| Protein GI | 222106643 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.124757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCGATC CGCTTGACGA CGACCACCCC TTTTCCTTCG CCACTGCCGT GAAGGCCGAT
CTCACCGGCG ATAGTCTGGA TCTTCAGGCC ACGGCGCTGG TCGAGTCCGG CTTTATCCGG
CAGATCATTC CCGCCCATTG GAAGACGGGC GGGGAATTGG TGGATCTGGA AGCGGTGCTT
GAAATGGCGC GCCTTCTGGC GGGCCGCAAT CCATCGCTGA TGCCCCGGCT GATGTATTCC
ATCGGGGCAA TCACGGTGCT CGATCTGGCT GGCACCGAGG CGCAGCGCAA GATCCTGTCG
GACTGGCTGC TTGCGGGCCA CAGCGTAGCC CTTGCCGTCA ACGAACCTGG CATTCGCAGC
GATCTGATCA ACAACCAGAC AAAGGCGGAA CGTCAGGGTG ACTGGTATGT GATCAATGGC
CGCAAATGGC TGGTCGGTCA GGCCGAAAAG GCGCGGGCCT TGATGGTCAT GGCCAAGACG
GGTGCAGGCG GACCGGCGGC CTTCTCGCTG TTTCTGATCG ACCGGCAGCC GCAATGGGAA
TCGACCCTGC CACATCCACG TGCAGAACTG TCCGGCATGC GCGGCATCGA TGTCGCCGAT
GTCGATATCG ATGTGGCCTG TGTCAATGTC GCAAACCGGG TGGGTGGCGA AGGCGAAGGC
ATCGAGCTGG TGTTTCGCGC CGAATCCGTC ATCAAGCTTC TGTCGATTGG TGCCATGCTT
GGCCCCTGCG AGAGCGCCTT GCGGCTGACC TATGGGGAGA TCTCCAAACA GGCGAATGGC
GGCCATCCAC ATCAGCATTT CCTGCTGGCT GGTGCCTATG CCGATTACCG GATCATGGAC
AGCGTTGCCA AGGCTGCGGC CCGCTTCGCG TCTTTCCGTC CGCAGCATTT TCCGGTGGCG
GCGGCGGTCG CCAAACAGAT CGCCCAGGAA TTCAGCAGCC GGATTTTCAC CAGCCTGATG
GCAGCCCTGG GTGCCCGCTC GGTGCTGGCG CAGGAGCCGG TCTCGGCGAT CCTTCAGAAA
TTGCGCCGCG ACGGTGAAGT GGCGCAATAT ATGGATATCA ATCCGCAGGT TAACCTCGGC
ATGTTGGCCA ATCAATTGCC CAGTCTGACC AAGCGTCGCA CCAAGCTGGA GCCAGGCCTT
GCGGATGCGC TGTTTGCGCA ATTGCAGGCG GAACTGTCAC CATCGTCGCC TTGCCCGGCC
ATGGTTCTTG CCAAGGTGCC GATGCTGAAC AGGGCTGGCG AGCCGTTGAC GGATTTGTTG
CCCGGCCTTG CCGAGCGGTT TGCCAAGGCG GCATCCGAAC AAGACAGTGC GGTGGTGGAC
GCGCTGCATG AGGCAGAGGC ACGCTTTGCC AGCCTGGAAG AGGGCATGGC TGAACTGCTG
GCCCTGCGCC AGGGCGAACG GCCGGAAGCC GTCAATGCGG GAGCGCAATT TGCACGGCTT
TATGCCGTGT CCTGCTGCGC GCTATCGGCA CTGGCTGAGG GTGGGGATGC GCTTCTGCCC
TTCATGCTGC AACGCCTGCT GGCCGGTGAT CGCTATGCCT TCGGCGGAGA AGATCGGTTC
TATCAGGCGG CTTGGCATCG TCTCGCAGAG GCGATGGGGG CTGGTGAAGA CGTTTATGGT
GATGAAAGAC GGCACGCTGC GGTTTAG
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| Protein sequence | MGDPLDDDHP FSFATAVKAD LTGDSLDLQA TALVESGFIR QIIPAHWKTG GELVDLEAVL
EMARLLAGRN PSLMPRLMYS IGAITVLDLA GTEAQRKILS DWLLAGHSVA LAVNEPGIRS
DLINNQTKAE RQGDWYVING RKWLVGQAEK ARALMVMAKT GAGGPAAFSL FLIDRQPQWE
STLPHPRAEL SGMRGIDVAD VDIDVACVNV ANRVGGEGEG IELVFRAESV IKLLSIGAML
GPCESALRLT YGEISKQANG GHPHQHFLLA GAYADYRIMD SVAKAAARFA SFRPQHFPVA
AAVAKQIAQE FSSRIFTSLM AALGARSVLA QEPVSAILQK LRRDGEVAQY MDINPQVNLG
MLANQLPSLT KRRTKLEPGL ADALFAQLQA ELSPSSPCPA MVLAKVPMLN RAGEPLTDLL
PGLAERFAKA ASEQDSAVVD ALHEAEARFA SLEEGMAELL ALRQGERPEA VNAGAQFARL
YAVSCCALSA LAEGGDALLP FMLQRLLAGD RYAFGGEDRF YQAAWHRLAE AMGAGEDVYG
DERRHAAV
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