| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1308 |
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| Symbol | |
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| ID | 4908795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1224963 |
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| End bp | 1226186 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125061 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001056198 |
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| Protein GI | 126459920 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0345991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGAAT TTAGGATAAT GGTTGACCCA TATCTCATCC CCGAGCAGTA TAAGTCGGAG
ATTGAGCTGG TCAGAAAGAC GGCGCGTGAA TTTGCCCAGA GGTATTTCAC GAGAGAGCTC
GCCCGCGAGG TGGATCACAA GGAGGAGTTT CCATGGGACT TGTATCGGAA GGCGGGCGAG
TTGGGGTTTA TTGCCGCTAC TCTGCCCCCG GAGTACGGCG GCGGGGGGCT TACGACGGAG
CTCGCCTCGG CGGTTATAAC CGAAGAGTTG GTGAGGGCTG ACACCACGCT GGGCCAGGGC
ATTCTCTCCG GGGCCTTTGG GCTCTACGCG TTGTATCTCT TCGGCACCGA GGAGCAGAAG
AAGCAGTACA TACCGCCCGT GGCTAGGGGC GAGAAGACCT TCTTCCTCGC TTTAACAGAG
CCGGACCATG GTAGCGATAT AACACAGCTC TCCACTGTGG CGAAGAAGGA GGGGGACTAC
TACGTGTTAA AGGGGATTAA GACGTTTATT ACAAATGCCC CAACGGCCGA GTACGGCCTC
ATCCTTGCGC AGACTGAGCC TGAGAAGGGG TACAGGGGCC AGACGCTGTT CCTCATTCAC
ACGGATTGGC CTGGCGTAGA CGTTAAGCCG CTGAAGGGGA AGATGGGGCA GAGGGCATCC
CCCCTGGGCG AGATTAGGCT AGACGGAGTA AAAGTGCCCA AGGAATACGT GGTGGGCGGG
CCGGAGGGAC TTAATAAGGG CTTCTACTGG GCTCTCCAGT ATTTAAACAT TGGGAGAGTG
CACGTCGGCG CCGTGGCGCT TGGCATGATG CTTGCGGCTT TTGATAGAGC GTACGACTTC
GCTCAGAAGA GGGTCCAGTT TGGCAGACCC ATCATAGAGT TCCAGCTTAT TCAACAGAAG
TTGGCCGAGA TGGCGCAGTT GATAGACATA TCTAGACTCG CCGTGTATAG GGCGCACTTA
ATTCTCGACG AGTACATCAA AGGCGCCGTG GAGCCGCGCA CAATGGCGGC AATTTCCTCA
ATCACTAAGG TCTTTGTCAC TGAAAATGCC ACAAAGGTGA TAGACCACGC AATTCAGATC
CTGGGCGGAA GCGGCTACAT GGAGGAGTAC GACGTGGAGA GGATCTGGAG AGACCACAGA
GTTACCCGCA TCTACGAGGG GACTACCGAG ATAAACACTT TGACAATTGT TGACTCGCTG
AGGCGGGGGT TCTACACTTT ATGA
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| Protein sequence | MAEFRIMVDP YLIPEQYKSE IELVRKTARE FAQRYFTREL AREVDHKEEF PWDLYRKAGE
LGFIAATLPP EYGGGGLTTE LASAVITEEL VRADTTLGQG ILSGAFGLYA LYLFGTEEQK
KQYIPPVARG EKTFFLALTE PDHGSDITQL STVAKKEGDY YVLKGIKTFI TNAPTAEYGL
ILAQTEPEKG YRGQTLFLIH TDWPGVDVKP LKGKMGQRAS PLGEIRLDGV KVPKEYVVGG
PEGLNKGFYW ALQYLNIGRV HVGAVALGMM LAAFDRAYDF AQKRVQFGRP IIEFQLIQQK
LAEMAQLIDI SRLAVYRAHL ILDEYIKGAV EPRTMAAISS ITKVFVTENA TKVIDHAIQI
LGGSGYMEEY DVERIWRDHR VTRIYEGTTE INTLTIVDSL RRGFYTL
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