| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1371 |
|---|
| Symbol | |
|---|
| ID | 4460763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1705980 |
|---|
| End bp | 1707149 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639702139 |
|---|
| Product | butyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_845497 |
|---|
| Protein GI | 116748810 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.183303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTATT TCTTGACTGA AGAACAGGTC ATGATCCAGG AACTGGCGGG CCAGATCGCG
CGTGAGAAAA TCAGGCCGGT CCGGGCGCAA CTGGACGAAC AGGAGGAGTT CCCATGGGAA
ATCATGAAGA TATGCGCGCA GGCCGACCTT TTCGGTCTAT ATATTCCTGA AGAGTATGGC
GGGCTTGGGG GCGGCATTCT CGAAAACTGC CTCGCCATCG AAAAAATTGC CGAGGCGTGC
ATCGGCATCG CCACCTCTTT TGCGGCCAGC GGCCTGGGGG CTTACCCGAT CCTTCTTTTC
GGAAGCGAGG CACTGAAGCG GGCCTACCTT CCCGATATCG CCTCAGGCAA ACGCCTTGCG
GCTTTCGGAC TGACCGAATC CGGAGCGGGC AGCGACGTAT CCGGCATACA AACCACCGCG
GTGCGCGACG GCGATCACTA TGTTCTCAAT GGGGCCAAGC AGTGGATCAC CAATGGCGGA
GAGGCGGAAA TATACTCCGT GCTCGCCATA ACCGACCGTT CCAAGGGCCC CAGGGGCGCC
AGCTTTTTCG TCGTGGAAAA AGACGATCCC GGCTTCTCTT TCGGCAAGAA AGAGAAGAAG
CTCGGCATAC GCGCCTCGGC CACCCGGGAA CTGGTGTTCC AGGACTGCCG GATCCCAAAA
GAACGGTTGA TCGGCAGGGA AGGCACGGGC TTCATTGTTG CCATGAAAAC CTTCGACAAG
TCGCGCCCCG GCATTGGAGC GCTCGGCGTC GGATTGTCCC AGGGCGCTCT GGACATCTCC
GTGGAATATG CCCGCAAGAG AATGCAGTTC GGGAAACCCA TCATCAGCTT CCAGGCAATC
CAGCACAAGC TCGCCGACAT GGCCATCAAA ACGGAAGCCG CGCGTGCGCT CATCTACGCC
GCGGCCCGCT ATATGGACAC CGACCCGCCC GATTCGAGCA AAGTGGCCGC CATGTGCAAG
GTGTTCGCCG GCGATGCGGC GCTCTACGCG GCCACCGAGG CCGTGCAGAT TCTCGGAGGA
TACGGCTACA TGCAGGACTA TCCGGTGGAA AAGATGATGC GGGACGCCAA GATCCTCCAG
ATTTACGAAG GAACCAACGA GATCCAGCGC AACATCATCG GTCAGGAATT GAACAAGGAA
TACAGCAGGC TGAAGGAGTC ATTCTTCTAG
|
|---|
| Protein sequence | MDYFLTEEQV MIQELAGQIA REKIRPVRAQ LDEQEEFPWE IMKICAQADL FGLYIPEEYG
GLGGGILENC LAIEKIAEAC IGIATSFAAS GLGAYPILLF GSEALKRAYL PDIASGKRLA
AFGLTESGAG SDVSGIQTTA VRDGDHYVLN GAKQWITNGG EAEIYSVLAI TDRSKGPRGA
SFFVVEKDDP GFSFGKKEKK LGIRASATRE LVFQDCRIPK ERLIGREGTG FIVAMKTFDK
SRPGIGALGV GLSQGALDIS VEYARKRMQF GKPIISFQAI QHKLADMAIK TEAARALIYA
AARYMDTDPP DSSKVAAMCK VFAGDAALYA ATEAVQILGG YGYMQDYPVE KMMRDAKILQ
IYEGTNEIQR NIIGQELNKE YSRLKESFF
|
|---|
| |