268 homologs were found in PanDaTox collection
for query gene YpsIP31758_0896 on replicon NC_009708
Organism: Yersinia pseudotuberculosis IP 31758



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009708  YpsIP31758_0896  Fic family protein  100 
 
 
380 aa  783    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  100 
 
 
380 aa  783    Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  100 
 
 
380 aa  783    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  74.74 
 
 
380 aa  615  1e-175  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  75.53 
 
 
380 aa  595  1e-169  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  65.96 
 
 
394 aa  523  1e-147  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  63.59 
 
 
386 aa  501  1e-141  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  38.89 
 
 
388 aa  269  5e-71  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4624  filamentation induced by cAMP protein Fic  27.05 
 
 
397 aa  97.8  3e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.946577 
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  23.77 
 
 
348 aa  91.3  2e-17  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_009975  MmarC6_0037  filamentation induced by cAMP protein Fic  30.17 
 
 
392 aa  91.7  2e-17  Methanococcus maripaludis C6  Archaea  normal  0.450631  n/a   
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  33.18 
 
 
251 aa  91.3  3e-17  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_013158  Huta_2627  filamentation induced by cAMP protein Fic  29.09 
 
 
384 aa  89.7  7e-17  Halorhabdus utahensis DSM 12940  Archaea  normal  0.828217  n/a   
 
 
-
 
NC_009135  MmarC5_0625  filamentation induced by cAMP protein Fic  28.7 
 
 
392 aa  89.4  9e-17  Methanococcus maripaludis C5  Archaea  normal  0.849792  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  23.48 
 
 
348 aa  89.4  9e-17  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  30.77 
 
 
243 aa  88.6  2e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  31.66 
 
 
317 aa  88.6  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  26.42 
 
 
380 aa  87.8  3e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1541  filamentation induced by cAMP protein Fic  24.71 
 
 
364 aa  86.3  7e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  31.41 
 
 
245 aa  84.7  0.000000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_012791  Vapar_3790  filamentation induced by cAMP protein Fic  24.71 
 
 
402 aa  85.1  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  29.36 
 
 
256 aa  84.3  0.000000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_2003  fic family protein  24.32 
 
 
377 aa  82  0.00000000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0278833  n/a   
 
 
-
 
NC_010524  Lcho_0896  filamentation induced by cAMP protein Fic  26.75 
 
 
406 aa  82  0.00000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0168  Fic family protein  31.8 
 
 
388 aa  80.5  0.00000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  28.71 
 
 
247 aa  80.1  0.00000000000006  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_010581  Bind_0293  filamentation induced by cAMP protein Fic  29.35 
 
 
219 aa  80.1  0.00000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008757  Pnap_4423  filamentation induced by cAMP protein Fic  33.33 
 
 
407 aa  79.3  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.395598 
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  27.75 
 
 
247 aa  78.2  0.0000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_009455  DehaBAV1_0190  filamentation induced by cAMP protein Fic  26.94 
 
 
384 aa  78.2  0.0000000000003  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2123  hypothetical protein  27.11 
 
 
368 aa  76.6  0.0000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0014  filamentation induced by cAMP protein Fic  30.74 
 
 
406 aa  76.3  0.0000000000009  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_013924  Nmag_4188  filamentation induced by cAMP protein Fic  26.28 
 
 
381 aa  75.9  0.000000000001  Natrialba magadii ATCC 43099  Archaea  normal  0.635354  n/a   
 
 
-
 
NC_008825  Mpe_A0010  hypothetical protein  27.65 
 
 
383 aa  75.5  0.000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0273  filamentation induced by cAMP protein Fic  31.71 
 
 
306 aa  75.1  0.000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0315  filamentation induced by cAMP protein Fic  28.57 
 
 
398 aa  75.1  0.000000000002  Polaromonas sp. JS666  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_009468  Acry_3358  filamentation induced by cAMP protein Fic  29.51 
 
 
413 aa  73.6  0.000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.855479  n/a   
 
 
-
 
NC_008340  Mlg_0509  filamentation induced by cAMP protein Fic  28.77 
 
 
387 aa  73.6  0.000000000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0233  fic family protein  25.54 
 
 
377 aa  73.2  0.000000000006  Treponema denticola ATCC 35405  Bacteria  normal  0.638848  n/a   
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  29.1 
 
 
267 aa  73.2  0.000000000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2057  filamentation induced by cAMP protein Fic  26.22 
 
 
377 aa  73.2  0.000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.280737  normal 
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  29.1 
 
 
267 aa  73.2  0.000000000008  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0276  filamentation induced by cAMP protein Fic  29.63 
 
 
387 aa  72.8  0.000000000009  Roseiflexus sp. RS-1  Bacteria  normal  0.475066  unclonable  0.0000132219 
 
 
-
 
NC_009339  Mflv_5504  filamentation induced by cAMP protein Fic  24.61 
 
 
394 aa  72.4  0.00000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0732622  normal  0.099278 
 
 
-
 
NC_004116  SAG2119  hypothetical protein  26.36 
 
 
373 aa  71.6  0.00000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2460  filamentation induced by cAMP protein Fic  29.06 
 
 
396 aa  71.6  0.00000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0373  filamentation induced by cAMP protein Fic  26.61 
 
 
371 aa  72  0.00000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.5223  n/a   
 
 
-
 
NC_008309  HS_0216  hypothetical protein  26.96 
 
 
373 aa  71.6  0.00000000002  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1077  filamentation induced by cAMP protein Fic  27.6 
 
 
393 aa  71.6  0.00000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.750525 
 
 
-
 
NC_008687  Pden_3305  filamentation induced by cAMP protein Fic  28.24 
 
 
393 aa  71.6  0.00000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.735842 
 
 
-
 
NC_010831  Cphamn1_2249  filamentation induced by cAMP protein Fic  25.91 
 
 
389 aa  70.9  0.00000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0094  filamentation induced by cAMP protein Fic  28.12 
 
 
387 aa  71.2  0.00000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0092  fic family protein  28.12 
 
 
358 aa  71.2  0.00000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3955  filamentation induced by cAMP protein Fic  28.12 
 
 
384 aa  70.9  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0617  filamentation induced by cAMP protein Fic  29.49 
 
 
393 aa  70.9  0.00000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0300  filamentation induced by cAMP protein Fic  29.03 
 
 
398 aa  70.9  0.00000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372367  normal 
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  28.95 
 
 
252 aa  70.1  0.00000000007  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_002977  MCA0835  fic family protein  31.08 
 
 
386 aa  68.9  0.0000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2696  filamentation induced by cAMP protein Fic  26.24 
 
 
253 aa  68.9  0.0000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0861  filamentation induced by cAMP protein Fic  30.61 
 
 
400 aa  68.6  0.0000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.244501 
 
 
-
 
NC_010814  Glov_0093  filamentation induced by cAMP protein Fic  35.9 
 
 
404 aa  68.6  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1889  filamentation induced by cAMP protein Fic  29.94 
 
 
454 aa  68.6  0.0000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011879  Achl_3978  filamentation induced by cAMP protein Fic  29.76 
 
 
422 aa  68.6  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  27.17 
 
 
443 aa  68.6  0.0000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_009975  MmarC6_0055  filamentation induced by cAMP protein Fic  30.43 
 
 
434 aa  68.2  0.0000000002  Methanococcus maripaludis C6  Archaea  normal  0.0125874  n/a   
 
 
-
 
NC_012918  GM21_2726  filamentation induced by cAMP protein Fic  27.31 
 
 
395 aa  68.6  0.0000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011666  Msil_1166  filamentation induced by cAMP protein Fic  30.69 
 
 
252 aa  67.4  0.0000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0608775 
 
 
-
 
NC_009637  MmarC7_1455  filamentation induced by cAMP protein Fic  26.2 
 
 
429 aa  67.4  0.0000000004  Methanococcus maripaludis C7  Archaea  normal  0.184885  normal  0.0996953 
 
 
-
 
NC_011883  Ddes_2358  filamentation induced by cAMP protein Fic  26.67 
 
 
371 aa  67.4  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0593  filamentation induced by cAMP protein Fic  30.59 
 
 
412 aa  66.2  0.0000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4190  filamentation induced by cAMP protein Fic  29.28 
 
 
367 aa  65.9  0.000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  31.05 
 
 
248 aa  66.2  0.000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1441  hypothetical protein  28.64 
 
 
367 aa  65.9  0.000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2915  hypothetical protein  33.08 
 
 
253 aa  65.9  0.000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_013158  Huta_1900  filamentation induced by cAMP protein Fic  26.61 
 
 
394 aa  65.9  0.000000001  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008391  Bamb_4212  filamentation induced by cAMP protein Fic  27.49 
 
 
424 aa  65.9  0.000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.515355  normal  0.918692 
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  28.05 
 
 
248 aa  65.9  0.000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_009621  Smed_6016  filamentation induced by cAMP protein Fic  26.16 
 
 
343 aa  65.5  0.000000002  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00688605 
 
 
-
 
NC_013595  Sros_3247  hypothetical protein  28.64 
 
 
377 aa  65.1  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.199811  normal  0.982755 
 
 
-
 
NC_008709  Ping_2528  filamentation induced by cAMP protein Fic  27.31 
 
 
357 aa  65.5  0.000000002  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1842  filamentation induced by cAMP protein Fic  25.63 
 
 
417 aa  65.5  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1010  filamentation induced by cAMP protein Fic  29.82 
 
 
401 aa  64.3  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2299  filamentation induced by cAMP protein Fic  30.6 
 
 
361 aa  64.7  0.000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3441  hypothetical protein  32.31 
 
 
253 aa  63.9  0.000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0086  filamentation induced by cAMP protein Fic  27.64 
 
 
304 aa  63.9  0.000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3268  filamentation induced by cAMP protein Fic  24.48 
 
 
381 aa  63.9  0.000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.592904  normal 
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  27.33 
 
 
431 aa  63.5  0.000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  27.87 
 
 
328 aa  63.5  0.000000006  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  27.33 
 
 
431 aa  63.2  0.000000007  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4217  hypothetical protein  29.63 
 
 
400 aa  63.2  0.000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.921636  normal  0.168634 
 
 
-
 
NC_013223  Dret_1880  filamentation induced by cAMP protein Fic  25.41 
 
 
389 aa  63.2  0.000000008  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.000804249  decreased coverage  0.000268134 
 
 
-
 
NC_009634  Mevan_0095  filamentation induced by cAMP protein Fic  25.95 
 
 
429 aa  63.2  0.000000008  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  28.24 
 
 
386 aa  62.8  0.000000009  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
NC_007406  Nwi_2109  filamentation induced by cAMP protein Fic  26.46 
 
 
391 aa  62.4  0.00000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0980  hypothetical protein  28.65 
 
 
367 aa  62.4  0.00000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0812833  n/a   
 
 
-
 
NC_007908  Rfer_4037  filamentation induced by cAMP protein Fic  33.11 
 
 
360 aa  62.4  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3924  filamentation induced by cAMP protein Fic  26.05 
 
 
391 aa  62.4  0.00000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1471  filamentation induced by cAMP protein Fic  26.05 
 
 
369 aa  62.4  0.00000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009253  Dred_0937  filamentation induced by cAMP protein Fic  28.37 
 
 
368 aa  62.8  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0154  filamentation induced by cAMP protein Fic  25.68 
 
 
393 aa  62  0.00000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0242065 
 
 
-
 
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