| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3790 |
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| Symbol | |
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| ID | 7970950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4005327 |
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| End bp | 4006535 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644794376 |
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| Product | filamentation induced by cAMP protein Fic |
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| Protein accession | YP_002945671 |
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| Protein GI | 239816761 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3177] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTCA ATCCCGCACC TTTGCAGGTC TACGACCAAC CTCATCAGTT CGAGCCATTG
CTGCCAACGC AAAAACTCGG CGAACTGAGC GAAATCACGC GCCGAATATT CGAGAAGTCG
TCCGAGATGA AAGGCTCCGC AAGTCCGCAA GCACGGGCTG CGCTGCGCGA GATCGTCCGA
TCGATGAACT CGTACTACTC GAACCGCATC GAGGGACAAA GCACACATCC CGTGAACATC
GAGCGCGCGC TGAGCAAAGA CTTTTCCGAC ACGCCGGACG TCGCCAGACG GCAGCGTGTC
GCACTGGCAC ACATCGACGC CGAACGGGAA CTGGAAGAAA TCGTCACCAC CGAAGCGGGC
GCACTGAGCA GCGGCTTCCT GAAACAAGCG CACGAGAACC TGTACCGCCG CCTCCCGGAA
CCCGATCGCC TCACCGATGA CGGTCGGGTC ATCATTCCCG GAAGCCTCCG CACGCATGAC
GTCGCGGTGG GCCGCCACCA GCCGCCAGCG TGGAAATCGA TCCCTCGGTT TCTCAAGAGG
ATGGATGAGG TCTACGGTGG CCTCAAGGGC ATCGATGCTG TGATCTACAC CATTGCAGCC
GCACATCATC GAATGGCCTG GACGCATCCC TTCGAAGACG GAAACGGGCG TGCCATCCGG
CTGCAGACCC ATTGCGCCCT GCATTTGATG AGCGGCGGCC TCTGGTCTGT CAATCGCGGC
CTGGCTCGCC AGCGCGACCG CTACTTCGAG ATGCTGGACA ACGCGGACAG CGCAAGGCAG
GGAGATCTCG ACGGGCGGGG GAATCTCAGC GAAAAAATGC TCTGGGAGTG GTGCCGCTAC
TTCCTCGAAC TGTGCGAAGA CCAAGTCAGT TTCATGGCTT CGATGCTCGA CCTTTCCAAG
CTCAAGGACC GCATGCGCGC CTACTTGCTG GTGCGCGGCG CGACGGAGGG CATCACGGAA
TATCGCGAGG AGGCACTGCT GCCGCTGCAT ACGATTGCCG TTGGTGGCAC GGTGTCGCGC
GGAGAGTTCA TCCGGATGAC CGGACTGGAA GAGCGAACGG CCCGAAAAGT GATTTCTCGA
TTCATCAAGG ACGGACTTCT GAAAAGCGAC AGCCATCGTT CGGAGCTGAG CATCGGTTTT
CCGCTCGGCT CGCTGAACAT CCTGTTTCCG AACCTCTACC CCGAGGCGGC AACGGCGGTG
CTGGAATAG
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| Protein sequence | MSVNPAPLQV YDQPHQFEPL LPTQKLGELS EITRRIFEKS SEMKGSASPQ ARAALREIVR
SMNSYYSNRI EGQSTHPVNI ERALSKDFSD TPDVARRQRV ALAHIDAERE LEEIVTTEAG
ALSSGFLKQA HENLYRRLPE PDRLTDDGRV IIPGSLRTHD VAVGRHQPPA WKSIPRFLKR
MDEVYGGLKG IDAVIYTIAA AHHRMAWTHP FEDGNGRAIR LQTHCALHLM SGGLWSVNRG
LARQRDRYFE MLDNADSARQ GDLDGRGNLS EKMLWEWCRY FLELCEDQVS FMASMLDLSK
LKDRMRAYLL VRGATEGITE YREEALLPLH TIAVGGTVSR GEFIRMTGLE ERTARKVISR
FIKDGLLKSD SHRSELSIGF PLGSLNILFP NLYPEAATAV LE
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