Gene EcSMS35_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3916 
Symbol 
ID6143990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3986926 
End bp3988221 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content51% 
IMG OID641618742 
ProductFic family protein 
Protein accessionYP_001745881 
Protein GI170680544 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AATCACCTCC CGGACTTATT CCTTTATCAC ACTTATCGGG TGAGGAACTC 
CTGGCCCACC TGCGCTTTAA CCGGGTTACC GATGAAAAAG GACGTTATCT GCCTTTTGAT
GAGTTGCAGT ACCGCATCAA AAAAGGAGAA AACGTCGATG TGGCGTGGAC GCTTACCCGT
CTGGCGCGCA ACGCGGCGAT CCAACGAATT AATTATTGCA ATGAAGCGGG TGAACAGGCC
GGATTCAACA TTACCCCGGT GATTGCAGAA GCGTGCGAGC TTGTCGACAA ACGTGCTACC
GCGCTGGCGC TGAAAGATCA GACTGAACGG TTACGCGGGG CCGGAGCCGA GTTAAGCCAG
TTACGCCTGG AAGAGCCGAT CACCAGCTCC CAGCTGGAGG GTGCGAATAC TACAACGCTG
GTGGCGAGAA AAATGCTGGA AACAGGGCGG TCGCCACGCA CTGAAGACGA GCATATGATT
GCGGGAAATG CCCGGCTGAT GGCGGAAATT CCGCACTTAC TCGCAGAACC GCTGACACCT
GCGCTTATTC GCCAGTTACA TGCCATTGGT ATGGGTGGAA TCAATGACGC GAAATATCGT
CCGGGAGAAT TTCGTGAAAC AGATGATGTT GTGATCGCCG ACTATGATGG CAATATAGTG
CATCAACCGC CCGCTGCGGC ATTGTTACCG GAACGGCTGG AAAAAGTTTG CCAGTGGTTA
AACAGCCATG AAGGGTATAT TCATCCGTTG GTCCGTGCCT GCATTCTGCA TTTTATGCTG
GCCCATGAAC ATCCGTTTCG GGATGGCAAC GGGCGCACCA GTCGGGCGCT GTTTTACTGG
TATATGCTGA AATCGGGCTA CGATGTCTTT AAATATATTT CCATCAGCCG TTTGCTTCAT
GCTGCACCGG TCAAATATGC CGCCAGCTAC CAGTACACTG AATCAGATGG TATGGATCTG
ACTTATTTCC TTGAATATCA GGCGGGTGTC ATTAAACGTG CTCTGCAAAA CTGGCAGCAG
CATATCGATG AAATTACACA ACGAAGCGCA AAACTCGATA GTGTGCTGTT TAGCTCTGGT
GTGCTTAAAC GCCTGAATCC GCGCCAGGTA ACGCTCCTGA ATGTGATGCT CGCCAATCCG
GGGAAAGAGT ACACAGTTGC TGAAATTAGC GCGAGCCTGG GCGTCTCTGA TAATACGGCT
CGAGCTGATT TACGGACAAT TGTTAAAGAA GGGTTTGCGC AAGAGAAGAA AATTAATGAC
CAGCAAGCCG TGTACTTCGC GCATTATCCG CTGTAA
 
Protein sequence
MAIKSPPGLI PLSHLSGEEL LAHLRFNRVT DEKGRYLPFD ELQYRIKKGE NVDVAWTLTR 
LARNAAIQRI NYCNEAGEQA GFNITPVIAE ACELVDKRAT ALALKDQTER LRGAGAELSQ
LRLEEPITSS QLEGANTTTL VARKMLETGR SPRTEDEHMI AGNARLMAEI PHLLAEPLTP
ALIRQLHAIG MGGINDAKYR PGEFRETDDV VIADYDGNIV HQPPAAALLP ERLEKVCQWL
NSHEGYIHPL VRACILHFML AHEHPFRDGN GRTSRALFYW YMLKSGYDVF KYISISRLLH
AAPVKYAASY QYTESDGMDL TYFLEYQAGV IKRALQNWQQ HIDEITQRSA KLDSVLFSSG
VLKRLNPRQV TLLNVMLANP GKEYTVAEIS ASLGVSDNTA RADLRTIVKE GFAQEKKIND
QQAVYFAHYP L