Gene Daci_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1077 
Symbol 
ID5746632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1190054 
End bp1191235 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID641296157 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001562107 
Protein GI160896525 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.750525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATT CCCCTACCAG CCAGCGGCTT GGCCGCTTCA TCGAGACATC CGCAGCGGGC 
GAAAAGGTGC GCGCCTTCGT GCCGCCACCG CTTCCGCCGG AGCCGGCCAT CGATGTGCTC
GCGCTCCTGG AAAAGCTCAG CCTTGCCGAG CGTGCGCTGG GACGGCTCGA TGGCATCACC
ATGCTGCTGC CCCGCCAGGA GCTGTTCCTC TACATGTACG TGCGCAAGGA GGCCGTGCTT
TCTTCGCAGA TCGAGGGCAC GCAATCGACG CTGTCGGACC TGCTGCGCTT CGAAGCCGAG
GCCCAGGCGG GCCAGCCCAT CGACGACATC CGCGAAGTTT CGAACTATGT GGACGCGATG
ATGTACGGAC TGGAGCGCCT GCGGGACCTG CCGCTGTCAC TGCGCCTGAT CCGCGAGATG
CATGGCCGGC TGTTGCAAAG CGCACGCGGC GGCACCAAAA GCCCCGGCGA GTTCCGGCGC
TCGCAGAACT GGATTGGCGG CACGCGTCCA GGCAACGCCT TGTTCGTGCC GCCGCCCGTC
AACGAGCTCG GCCCCTGCCT CGACGCCTTT GAACGCTTCA TGCACGAAGA TGCCTCCCGC
CTGCCCGCCC TCATCAAGGC GGGCCTGCTG CACGTGCAAT TCGAGACACT GCATCCGTTC
CTCGATGGCA ATGGCCGCAT CGGTCGCCTG CTGGTCACGC TGTATCTCTG CATCAACGGC
GTGCTGAACA AGCCGCTGCT CTACCTCAGC CTTTTTCTCA AGACGCACCG GGCCGAGTAC
TACCGGCTGC TCCAGGAAGT GCGCGAGAAC GGCAATTGGG AAGCCTGGCT CGACTTCTTT
CTCACCGGCG TGGCACAGAC CGCGAACCAG GCCTTCGAGG CCGCCACCCA TATCGTCGAC
CTGTTCAGGC AGGACCGCGA GCGCATCGCG ACCGAAGGCG AGCGCGCCAA CTCCACACTG
CGCATCCACG ACCTGTTCCA GCTCAACCCC TTCCTGACGT CGAACCAACT GGTCCGGCAG
ACAGGACTGT CCTCGCCCAC CGTCAACACG GCGCTCGCCG ACTTGCAGCG CCTGGGCATC
ATCGAGGAAG TGACCGGCCG CAAGCGAGGC CGGGTCTTCA GCTATCGGCG CTATCTTTCC
GTGCTCAACG AGGGCACGGA TCCGCTACCC CGGCCGGCCT GA
 
Protein sequence
MPDSPTSQRL GRFIETSAAG EKVRAFVPPP LPPEPAIDVL ALLEKLSLAE RALGRLDGIT 
MLLPRQELFL YMYVRKEAVL SSQIEGTQST LSDLLRFEAE AQAGQPIDDI REVSNYVDAM
MYGLERLRDL PLSLRLIREM HGRLLQSARG GTKSPGEFRR SQNWIGGTRP GNALFVPPPV
NELGPCLDAF ERFMHEDASR LPALIKAGLL HVQFETLHPF LDGNGRIGRL LVTLYLCING
VLNKPLLYLS LFLKTHRAEY YRLLQEVREN GNWEAWLDFF LTGVAQTANQ AFEAATHIVD
LFRQDRERIA TEGERANSTL RIHDLFQLNP FLTSNQLVRQ TGLSSPTVNT ALADLQRLGI
IEEVTGRKRG RVFSYRRYLS VLNEGTDPLP RPA