Gene TDE0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0233 
Symbol 
ID2739085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp265877 
End bp267010 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content33% 
IMG OID637159107 
Productfic family protein 
Protein accessionNP_970849 
Protein GI42525751 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.638848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA AAGACTTTAA ATCCGGCAGC TTAAAACAAG GATATAAATA TCAATATTTT 
ATGCCTGAAA AGATAAATCA TGATTTTTCA TGGGAAGATA CCTCTATTAA CACTCTTTTA 
GAAAAAGCTT CTTTTCATTT AGGAGCCTTA AATTCTTTTT CATCTCTGGT TCCTGATGCA 
GATATGTTTA TCATAATGCA TATTTTTAAA GAAGCCGTTA TATCAAACCG TATTGAAGGA 
ACTCGAACAA ATATTGAAGA AGCATTAAAT GAACAAGACA ATTTAGACCC CGAAAAAAGA 
AACGATTGGC AGGAAGTTCA TAATTATGTA AAAGCCATGA ATAACGCAAT ACAGGAGCTT 
GAAAATTTAC CCCTTTCAAA TCGTCTGATT AAAAATACTC ATAAAATATT GCTTTCAACC 
GGAAGAGGAG AACATAAAAG TCCGGGAGAA TTCCGGATTT CTCAAAATTG GATAGGCGGG 
ACAACTCTTT CGGATGCAGT TTTTATTCCT CCTGCACATG AAGAACTTCC CGAGCTTTTA 
TCGGACTTGG AGCTTTTTTT AAATAATACC AATATCAACA TTCCGCACTT AATACGTATT 
GCAATAGCCC ACTACCAATT TGAAACAATA CATCCATTTT TAGACGGAAA TGGACGAATC 
GGCAGACTTT TGATAAGTCT TTATTTGGTA CACAGTAAGG TCTTACAAAA ACCTCTTTTA 
TATCTTTCCG ATTTTTTTGA AAAAAATAAA ACCCTTTATT ATGATAACCT CACCTTTGTG 
CGGACAAAAA ATGATATGTC TCAATGGATA AAGTATTTTT TAGAGGGAGT AAGTCAAACT 
GCCGAAAATT CGGCACAAAC CTTAAAGAAA ATAATTGAGC TAAAAACCGA TTTGGAAAAA 
AACAAGCTGC TTTCTCTTGG TAAACGTACC AAAACGGCAA ACGAATTTTT ATATTTCCTT 
TTTCATAGTC CCGTTATTAC AAGTACTGCC CTCCAAAAAG AAATGAAAAT TACAGCCAAA 
ACAGCCAATA GCTTAATAGA TGCCTTTATC GGACTGAATA TACTCAAAGA ACGTACAGGA 
TATTCACGAA ATAGAATATT TGTTTTTAAT AAATACGTCG AACTTTTTAT GTAG
 
Protein sequence
MDIKDFKSGS LKQGYKYQYF MPEKINHDFS WEDTSINTLL EKASFHLGAL NSFSSLVPDA 
DMFIIMHIFK EAVISNRIEG TRTNIEEALN EQDNLDPEKR NDWQEVHNYV KAMNNAIQEL 
ENLPLSNRLI KNTHKILLST GRGEHKSPGE FRISQNWIGG TTLSDAVFIP PAHEELPELL 
SDLELFLNNT NINIPHLIRI AIAHYQFETI HPFLDGNGRI GRLLISLYLV HSKVLQKPLL 
YLSDFFEKNK TLYYDNLTFV RTKNDMSQWI KYFLEGVSQT AENSAQTLKK IIELKTDLEK 
NKLLSLGKRT KTANEFLYFL FHSPVITSTA LQKEMKITAK TANSLIDAFI GLNILKERTG 
YSRNRIFVFN KYVELFM