| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4423 |
|---|
| Symbol | |
|---|
| ID | 4685339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | - |
|---|
| Start bp | 334304 |
|---|
| End bp | 335527 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639826278 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_973443 |
|---|
| Protein GI | 121583001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.395598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC CTTCAAAAGT CGTCGCAGTG TACGATCAGC CCCACCAGTT CGAGCCCCTG
CTGCCCCAGC GCGAACTCGC AGGCCTCATC GAGCGCACGC GCACTGTCCT GGAGAAGGCC
TACCGCCTGC AGCATTGCGT CGCGCCCAGC ACGCGCCAGT CGCTGCAGCG CCTGGTGCGG
GGAATGAACT CGTACTATTC CAACCGCATC GAAGGCCAGG GCACGCACCC GCTGAACATC
GAGCGTGCGC TGAGCGCGGA CTTCTCCAAA GTTCCCGATG TGGCCCAGCG CCAGCGCCTG
GCCCTGGCCC ACATGCAGGC CGAGCAGGAG CTCGAAGGCT TGCTGGCGCC GGGCGCGGGA
AGTGAGCGCG AGGCCTTGCA ATCGAGTTTT CTGGTCCAGG CCCATGCCGC CTTGTACTGC
CGGCTGCAGG CGCCTGACCG CACGACCGAG GATGGGCGCG TGATCGAGCC CGGCCAGCTG
CGCCGGGAGG ACGTCAGCGT CGGCAGGCAC CAGCCGCCGA CAGCGGCATC CGTGCCCGCG
TTCCTGTCCC GGATGGACGA GGTGTATCCC CGCATCAAGG GGCTCGATGG CCTTTTATTC
GGCATTGCCG CTGCCCATCA CCGCGCCGCA TGGGTTCACC CTTTCGGGGA TGGCAACGGG
CGGGCATGCC GGCTGCAGAC GCATTGCGCG CTCCTTGCGA CAAGTGCCGG GCTGTGGTCC
GTCAACAGGG GGCTGGCGCG GCAACGCGAC AGGTATTACG CCGTGCTGGC CAACGCGGAC
AGCGCGCGCC AGGGCGACCT TGATGGCCGT GGCAATCTGA GTGAAAAGAT GCTGCGCGAG
TGGTGCGGCT TCTTCATCGA GCTGGCCGAT GACCAGGTCA CGTTCATGAC GCAAATGCTC
AGACTTGACG GCTTGCGCGA ACGCATTGCC ACCTTGATGC TGGTGCGCTC AGAAAGCTCG
CAGTTCGAGC ACTACACCAA GCACGCTACG CTCGCCTTGC ACCATGTGCT TTTGGGCGGC
CCGGTCTCGC GCGGGGACTT TTGCCAGATG ACGGGCATGG CCGAGCGCAG CGCACGCCGC
ACGCTGGCCC AGCTGCTCAA GGACAAGCTC TTGGTAAGCG ACAACCCCAA AGGGCCAGTG
ACCTTCAACT TTGCGCTGGA TGCCCTGCCC ATCTTGCTGC CAGACCTGTA TCCGGAAGCG
GCCACCACGA ACACCGAGCC ATGA
|
|---|
| Protein sequence | MSMPSKVVAV YDQPHQFEPL LPQRELAGLI ERTRTVLEKA YRLQHCVAPS TRQSLQRLVR
GMNSYYSNRI EGQGTHPLNI ERALSADFSK VPDVAQRQRL ALAHMQAEQE LEGLLAPGAG
SEREALQSSF LVQAHAALYC RLQAPDRTTE DGRVIEPGQL RREDVSVGRH QPPTAASVPA
FLSRMDEVYP RIKGLDGLLF GIAAAHHRAA WVHPFGDGNG RACRLQTHCA LLATSAGLWS
VNRGLARQRD RYYAVLANAD SARQGDLDGR GNLSEKMLRE WCGFFIELAD DQVTFMTQML
RLDGLRERIA TLMLVRSESS QFEHYTKHAT LALHHVLLGG PVSRGDFCQM TGMAERSARR
TLAQLLKDKL LVSDNPKGPV TFNFALDALP ILLPDLYPEA ATTNTEP
|
|---|
| |