Gene Pden_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3305 
Symbol 
ID4581864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp470021 
End bp471202 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content62% 
IMG OID639770624 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_917077 
Protein GI119386022 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.735842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCAACCCAGA TCAGCGCCTT GGCCGATATG TCGAAACGCC TGTCGCAGGC 
GAGATGGTGC GCGCTTTCGT TCCGCCGCCT CTGCCGCCGA AGCCGCAGAT CGACGTCCTG
GCGCTTCTGG ACCGGCTGAG CCTCGCAGAG CGCGCGCTCG GGCGACTGGA TGGCATTACC
ATGCTACTGC CGCGCCAGGA ACTCTTCCTC TATATGTATG TGCGCAAGGA GGCGGTGCTC
TCGTCCCAGA TCGAGGGGAC GCAATCCACA CTGACCGATC TTCTGCGCTT CGAGACCGAG
GCACAGGCGG GGGAACCGAT CGACGACATC CGCGAAGTGT CGAACTACGT GGATGCGATG
ATGTATGGGC TGGAACGGCT AGAAGAGCTG CCGCTGTCCT TGCGTCTGAT CCGCGAGATG
CACGCCCGAC TGCTGCAAAG CGGACGCGGT GACACCAAAA GCCCGGGTGA CTTCCGCCGT
TCCCAGAACT GGATCGGCGG CTCACGTCCC GGAAATGCGC TCTACGTACC GCCGCCCGTC
ACCGAACTCG ATGCCTGCCT CGATGCGCTG GAGCGTTTCA TTCACGAAGA CGGATCGCAA
TTGCCGGCAT TGATCAAGGC CGGACTGCTG CATGTCCAGT TCGAGACCAT CCACCCGTTC
CTCGATGGCA ACGGCCGCAT CGGTCGCCTT TTGGTGACGC TGTATCTTTG CGTCAACGGG
GTGCTCCGCA AGCCGCTGCT CTATCTCAGC CTCTATCTGA AGACGCATCG TGCCGACTAT
TATCGGCTGC TGCAGGAAGT GCGGGAGAAC GGCAATTGGG AGGCCTGGCT CGACTTCTTC
TTGGCGGGTG TAGCCGAAAC GGCGAATCAG GCTTTCGAGG CGGCCACCCG GATTGTCGAC
CTCTTCAAGG AAGATCGCGA GCGGATCACG AACGAAAGCG ACCGCGCGGG CTCGACGCTC
CGCATCCACG ATCTCTTCCA GCAGAACCCG TTCCTGACCT CCAACCAGCT TGTGCAGAAA
ACGGGCTTGT CGGCGCCGAC GGTCAATGCG GCATTGGCCG ATCTGGAGAA GATGGGAATC
GTCGAGGAGG TCACCGGGCG CAAGCGGGGG CGGGTGTTCA GCTACCAGCG CTATCTTGCG
ATCCTCAGCG AGGGAACTGA TCCTTTGCCT GCCGCCACCT GA
 
Protein sequence
MTDSNPDQRL GRYVETPVAG EMVRAFVPPP LPPKPQIDVL ALLDRLSLAE RALGRLDGIT 
MLLPRQELFL YMYVRKEAVL SSQIEGTQST LTDLLRFETE AQAGEPIDDI REVSNYVDAM
MYGLERLEEL PLSLRLIREM HARLLQSGRG DTKSPGDFRR SQNWIGGSRP GNALYVPPPV
TELDACLDAL ERFIHEDGSQ LPALIKAGLL HVQFETIHPF LDGNGRIGRL LVTLYLCVNG
VLRKPLLYLS LYLKTHRADY YRLLQEVREN GNWEAWLDFF LAGVAETANQ AFEAATRIVD
LFKEDRERIT NESDRAGSTL RIHDLFQQNP FLTSNQLVQK TGLSAPTVNA ALADLEKMGI
VEEVTGRKRG RVFSYQRYLA ILSEGTDPLP AAT